Protein–RNA interactions for Protein: Q06236

SHH4, Mitochondrial inner membrane protein SHH4, yeastyeast

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH4Q06236 RPL40BYKR094C 387 nt0.92□□□□□ -2.26
SHH4Q06236 YCL007CYCL007C 393 nt0.92□□□□□ -2.26
SHH4Q06236 OSH6YKR003W 1347 nt0.91□□□□□ -2.26
SHH4Q06236 NUP82YJL061W 2142 nt0.91□□□□□ -2.26
SHH4Q06236 NUP192YJL039C 5052 nt0.91□□□□□ -2.26
SHH4Q06236 TRM3YDL112W 4311 nt0.91□□□□□ -2.26
SHH4Q06236 IRC2YDR112W 309 nt0.91□□□□□ -2.26
SHH4Q06236 YGR283CYGR283C 1026 nt0.91□□□□□ -2.26
SHH4Q06236 COA6YMR244C-A 315 nt0.91□□□□□ -2.26
SHH4Q06236 URA10YMR271C 684 nt0.91□□□□□ -2.26
SHH4Q06236 RPS7BYNL096C 573 nt0.91□□□□□ -2.26
SHH4Q06236 YNL235CYNL235C 432 nt0.91□□□□□ -2.26
SHH4Q06236 SHE4YOR035C 2370 nt0.91□□□□□ -2.26
SHH4Q06236 SEC3YER008C 4011 nt0.9□□□□□ -2.26
SHH4Q06236 YDL032WYDL032W 312 nt0.9□□□□□ -2.27
SHH4Q06236 YDL068WYDL068W 330 nt0.9□□□□□ -2.27
SHH4Q06236 YDR115WYDR115W 318 nt0.9□□□□□ -2.27
SHH4Q06236 CMC1YKL137W 336 nt0.9□□□□□ -2.27
SHH4Q06236 HYM1YKL189W 1200 nt0.9□□□□□ -2.27
SHH4Q06236 YLL020CYLL020C 306 nt0.9□□□□□ -2.27
SHH4Q06236 MSH3YCR092C 3057 nt0.9□□□□□ -2.27
SHH4Q06236 GNT1YOR320C 1476 nt0.9□□□□□ -2.27
SHH4Q06236 SPR3YGR059W 1539 nt0.89□□□□□ -2.27
SHH4Q06236 EMT1tM(CAU)D 73 nt0.89□□□□□ -2.27
SHH4Q06236 EMT5tM(CAU)J1 73 nt0.89□□□□□ -2.27
SHH4Q06236 EMT3tM(CAU)J2 73 nt0.89□□□□□ -2.27
SHH4Q06236 EMT4tM(CAU)M 73 nt0.89□□□□□ -2.27
SHH4Q06236 EMT2tM(CAU)O2 73 nt0.89□□□□□ -2.27
SHH4Q06236 LSO2YGR169C-A 279 nt0.89□□□□□ -2.27
SHH4Q06236 DFG10YIL049W 762 nt0.89□□□□□ -2.27
SHH4Q06236 TIM8YJR135W-A 264 nt0.89□□□□□ -2.27
SHH4Q06236 YBL108WYBL108W 306 nt0.89□□□□□ -2.27
SHH4Q06236 YOR161W-BYOR161W-B 261 nt0.89□□□□□ -2.27
SHH4Q06236 TIM18YOR297C 579 nt0.89□□□□□ -2.27
SHH4Q06236 FMP23YBR047W 528 nt0.89□□□□□ -2.27
SHH4Q06236 YJR098CYJR098C 1971 nt0.88□□□□□ -2.27
SHH4Q06236 PHR1YOR386W 1698 nt0.88□□□□□ -2.27
SHH4Q06236 YER038W-AYER038W-A 381 nt0.88□□□□□ -2.27
SHH4Q06236 IES5YER092W 378 nt0.88□□□□□ -2.27
SHH4Q06236 YGR265WYGR265W 411 nt0.88□□□□□ -2.27
SHH4Q06236 PFD1YJL179W 330 nt0.88□□□□□ -2.27
SHH4Q06236 TMA10YLR327C 261 nt0.88□□□□□ -2.27
SHH4Q06236 BRX1YOL077C 876 nt0.88□□□□□ -2.27
SHH4Q06236 YPL080CYPL080C 327 nt0.88□□□□□ -2.27
SHH4Q06236 SEC5YDR166C 2916 nt0.88□□□□□ -2.27
SHH4Q06236 YDR034C-CYDR034C-C 1317 nt0.88□□□□□ -2.27
SHH4Q06236 YLR410W-AYLR410W-A 1317 nt0.88□□□□□ -2.27
SHH4Q06236 YLR422WYLR422W 5799 nt0.87□□□□□ -2.27
SHH4Q06236 KAR3YPR141C 2190 nt0.87□□□□□ -2.27
SHH4Q06236 SWT1YOR166C 1377 nt0.87□□□□□ -2.27
SHH4Q06236 SEF1YBL066C 3447 nt0.87□□□□□ -2.27
SHH4Q06236 CMS1YLR003C 876 nt0.87□□□□□ -2.27
SHH4Q06236 ARV1YLR242C 966 nt0.87□□□□□ -2.27
SHH4Q06236 YOR364WYOR364W 369 nt0.87□□□□□ -2.27
SHH4Q06236 YBR287WYBR287W 1284 nt0.87□□□□□ -2.27
SHH4Q06236 BEM2YER155C 6504 nt0.87□□□□□ -2.27
SHH4Q06236 MAK10YEL053C 2202 nt0.87□□□□□ -2.27
SHH4Q06236 YCS4YLR272C 3531 nt0.86□□□□□ -2.27
SHH4Q06236 TDA2YER071C 381 nt0.86□□□□□ -2.27
SHH4Q06236 RTR1YER139C 681 nt0.86□□□□□ -2.27
SHH4Q06236 YGL217CYGL217C 342 nt0.86□□□□□ -2.27
SHH4Q06236 YIL030W-AYIL030W-A 339 nt0.86□□□□□ -2.27
SHH4Q06236 RCN1YKL159C 636 nt0.86□□□□□ -2.27
SHH4Q06236 YBL073WYBL073W 312 nt0.86□□□□□ -2.27
SHH4Q06236 YPR177CYPR177C 372 nt0.86□□□□□ -2.27
SHH4Q06236 REF2YDR195W 1602 nt0.86□□□□□ -2.27
SHH4Q06236 RAD50YNL250W 3939 nt0.85□□□□□ -2.27
SHH4Q06236 SLX4YLR135W 2247 nt0.85□□□□□ -2.27
SHH4Q06236 CDC25YLR310C 4770 nt0.85□□□□□ -2.27
SHH4Q06236 CRG1YHR209W 876 nt0.85□□□□□ -2.27
SHH4Q06236 ACF4YJR083C 930 nt0.85□□□□□ -2.27
SHH4Q06236 YBL062WYBL062W 381 nt0.85□□□□□ -2.27
SHH4Q06236 MDM32YOR147W 1869 nt0.85□□□□□ -2.27
SHH4Q06236 YPR172WYPR172W 603 nt0.85□□□□□ -2.27
SHH4Q06236 YCL023CYCL023C 348 nt0.85□□□□□ -2.27
SHH4Q06236 SWI4YER111C 3282 nt0.84□□□□□ -2.27
SHH4Q06236 YBL068W-AYBL068W-A 237 nt0.84□□□□□ -2.27
SHH4Q06236 RPL33BYOR234C 324 nt0.84□□□□□ -2.27
SHH4Q06236 DOP1YDR141C 5097 nt0.84□□□□□ -2.28
SHH4Q06236 ROM2YLR371W 4071 nt0.84□□□□□ -2.28
SHH4Q06236 YLL054CYLL054C 2532 nt0.84□□□□□ -2.28
SHH4Q06236 EAF1YDR359C 2949 nt0.84□□□□□ -2.28
SHH4Q06236 CLU1YMR012W 3834 nt0.84□□□□□ -2.28
SHH4Q06236 IRR1YIL026C 3453 nt0.84□□□□□ -2.28
SHH4Q06236 SLS1YLR139C 1932 nt0.83□□□□□ -2.28
SHH4Q06236 YBR184WYBR184W 1572 nt0.83□□□□□ -2.28
SHH4Q06236 YER158W-AYER158W-A 216 nt0.83□□□□□ -2.28
SHH4Q06236 RPB11YOL005C 363 nt0.83□□□□□ -2.28
SHH4Q06236 SPT7YBR081C 3999 nt0.83□□□□□ -2.28
SHH4Q06236 SPO75YLL005C 2607 nt0.82□□□□□ -2.28
SHH4Q06236 YOL106WYOL106W 354 nt0.82□□□□□ -2.28
SHH4Q06236 YCL046WYCL046W 324 nt0.82□□□□□ -2.28
SHH4Q06236 SGO1YOR073W 1773 nt0.82□□□□□ -2.28
SHH4Q06236 STB6YKL072W 2301 nt0.82□□□□□ -2.28
SHH4Q06236 VPS54YDR027C 2670 nt0.81□□□□□ -2.28
SHH4Q06236 YGL024WYGL024W 336 nt0.81□□□□□ -2.28
SHH4Q06236 VMA7YGR020C 357 nt0.81□□□□□ -2.28
SHH4Q06236 RPL37AYLR185W 267 nt0.81□□□□□ -2.28
SHH4Q06236 DDR48YMR173W 1293 nt0.81□□□□□ -2.28
SHH4Q06236 YNL114CYNL114C 372 nt0.81□□□□□ -2.28
Retrieved 100 of 7,029 protein–RNA pairs in 24.7 ms