Protein–RNA interactions for Protein: Q04377

LCD1, DNA damage checkpoint protein LCD1, yeastyeast

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LCD1Q04377 KAR3YPR141C 2190 nt3.02□□□□□ -1.93
LCD1Q04377 DNL4YOR005C 2835 nt3.02□□□□□ -1.93
LCD1Q04377 RPL35AYDL191W 363 nt3.02□□□□□ -1.93
LCD1Q04377 ERP6YGL002W 651 nt3.02□□□□□ -1.93
LCD1Q04377 IPT1YDR072C 1584 nt3.02□□□□□ -1.93
LCD1Q04377 YJL070CYJL070C 2667 nt3.01□□□□□ -1.93
LCD1Q04377 CSN9YDR179C 489 nt3.01□□□□□ -1.93
LCD1Q04377 QCR7YDR529C 384 nt3.01□□□□□ -1.93
LCD1Q04377 YJL015CYJL015C 285 nt3.01□□□□□ -1.93
LCD1Q04377 RPL32YBL092W 393 nt3.01□□□□□ -1.93
LCD1Q04377 snR51snR51 107 nt3.01□□□□□ -1.93
LCD1Q04377 SAK1YER129W 3429 nt3□□□□□ -1.93
LCD1Q04377 RLI1YDR091C 1827 nt3□□□□□ -1.93
LCD1Q04377 MRD1YPR112C 2664 nt3□□□□□ -1.93
LCD1Q04377 YGL014C-AYGL014C-A 162 nt3□□□□□ -1.93
LCD1Q04377 YGL149WYGL149W 306 nt3□□□□□ -1.93
LCD1Q04377 LSM7YNL147W 348 nt3□□□□□ -1.93
LCD1Q04377 YOP1YPR028W 543 nt3□□□□□ -1.93
LCD1Q04377 MPH1YIR002C 2982 nt3□□□□□ -1.93
LCD1Q04377 SEC26YDR238C 2922 nt2.99□□□□□ -1.93
LCD1Q04377 YGL024WYGL024W 336 nt2.99□□□□□ -1.93
LCD1Q04377 YML037CYML037C 1023 nt2.99□□□□□ -1.93
LCD1Q04377 DNA2YHR164C 4569 nt2.99□□□□□ -1.93
LCD1Q04377 NUP120YKL057C 3114 nt2.98□□□□□ -1.93
LCD1Q04377 PAC1YOR269W 1485 nt2.98□□□□□ -1.93
LCD1Q04377 YDL025W-AYDL025W-A 105 nt2.98□□□□□ -1.93
LCD1Q04377 RTC6YPL183W-A 282 nt2.98□□□□□ -1.93
LCD1Q04377 MET6YER091C 2304 nt2.98□□□□□ -1.93
LCD1Q04377 DIS3YOL021C 3006 nt2.98□□□□□ -1.93
LCD1Q04377 tW(CCA)G1tW(CCA)G1 72 nt2.97□□□□□ -1.93
LCD1Q04377 tW(CCA)G2tW(CCA)G2 72 nt2.97□□□□□ -1.93
LCD1Q04377 tW(CCA)JtW(CCA)J 72 nt2.97□□□□□ -1.93
LCD1Q04377 tW(CCA)KtW(CCA)K 72 nt2.97□□□□□ -1.93
LCD1Q04377 tW(CCA)MtW(CCA)M 72 nt2.97□□□□□ -1.93
LCD1Q04377 tW(CCA)PtW(CCA)P 72 nt2.97□□□□□ -1.93
LCD1Q04377 GRX8YLR364W 330 nt2.97□□□□□ -1.93
LCD1Q04377 JLP2YMR132C 627 nt2.97□□□□□ -1.93
LCD1Q04377 RPL20AYMR242C 519 nt2.97□□□□□ -1.93
LCD1Q04377 YPR203WYPR203W 309 nt2.97□□□□□ -1.93
LCD1Q04377 snR43snR43 209 nt2.97□□□□□ -1.93
LCD1Q04377 NCL1YBL024W 2055 nt2.96□□□□□ -1.94
LCD1Q04377 GUP1YGL084C 1683 nt2.96□□□□□ -1.94
LCD1Q04377 KSP1YHR082C 3090 nt2.96□□□□□ -1.94
LCD1Q04377 CYC7YEL039C 342 nt2.96□□□□□ -1.94
LCD1Q04377 ARP8YOR141C 2646 nt2.96□□□□□ -1.94
LCD1Q04377 ESC1YMR219W 4977 nt2.96□□□□□ -1.94
LCD1Q04377 YPL150WYPL150W 2706 nt2.96□□□□□ -1.94
LCD1Q04377 YPR089WYPR089W 2667 nt2.96□□□□□ -1.94
LCD1Q04377 HTL1YCR020W-B 237 nt2.95□□□□□ -1.94
LCD1Q04377 IKI3YLR384C 4050 nt2.95□□□□□ -1.94
LCD1Q04377 JSN1YJR091C 3276 nt2.95□□□□□ -1.94
LCD1Q04377 TCB2YNL087W 3537 nt2.94□□□□□ -1.94
LCD1Q04377 UBP11YKR098C 2154 nt2.94□□□□□ -1.94
LCD1Q04377 PTC5YOR090C 1719 nt2.94□□□□□ -1.94
LCD1Q04377 YDR209CYDR209C 414 nt2.94□□□□□ -1.94
LCD1Q04377 HTB2YBL002W 396 nt2.94□□□□□ -1.94
LCD1Q04377 FPR1YNL135C 345 nt2.94□□□□□ -1.94
LCD1Q04377 OSH6YKR003W 1347 nt2.93□□□□□ -1.94
LCD1Q04377 RPO41YFL036W 4056 nt2.93□□□□□ -1.94
LCD1Q04377 YER079C-AYER079C-A 339 nt2.93□□□□□ -1.94
LCD1Q04377 tM(CAU)Q1tM(CAU)Q1 76 nt2.93□□□□□ -1.94
LCD1Q04377 YGR265WYGR265W 411 nt2.93□□□□□ -1.94
LCD1Q04377 PRP6YBR055C 2700 nt2.93□□□□□ -1.94
LCD1Q04377 DUG2YBR281C 2637 nt2.93□□□□□ -1.94
LCD1Q04377 BNR1YIL159W 4128 nt2.93□□□□□ -1.94
LCD1Q04377 SGD1YLR336C 2700 nt2.92□□□□□ -1.94
LCD1Q04377 RPS27AYKL156W 249 nt2.92□□□□□ -1.94
LCD1Q04377 YKL183C-AYKL183C-A 213 nt2.92□□□□□ -1.94
LCD1Q04377 YPR099CYPR099C 357 nt2.92□□□□□ -1.94
LCD1Q04377 MLH1YMR167W 2310 nt2.92□□□□□ -1.94
LCD1Q04377 DOT6YER088C 2013 nt2.92□□□□□ -1.94
LCD1Q04377 SGS1YMR190C 4344 nt2.91□□□□□ -1.94
LCD1Q04377 NFT1YKR103W 3657 nt2.91□□□□□ -1.94
LCD1Q04377 YDR048CYDR048C 315 nt2.91□□□□□ -1.94
LCD1Q04377 YDR344CYDR344C 444 nt2.91□□□□□ -1.94
LCD1Q04377 PHS1YJL097W 654 nt2.91□□□□□ -1.94
LCD1Q04377 HRD3YLR207W 2502 nt2.91□□□□□ -1.94
LCD1Q04377 YBL005W-BYBL005W-B 5268 nt2.91□□□□□ -1.94
LCD1Q04377 FIR1YER032W 2631 nt2.9□□□□□ -1.94
LCD1Q04377 RRP12YPL012W 3687 nt2.9□□□□□ -1.94
LCD1Q04377 MMS1YPR164W 4224 nt2.9□□□□□ -1.94
LCD1Q04377 PDR1YGL013C 3207 nt2.9□□□□□ -1.94
LCD1Q04377 YCR018C-AYCR018C-A 255 nt2.9□□□□□ -1.95
LCD1Q04377 RBK1YCR036W 1002 nt2.9□□□□□ -1.95
LCD1Q04377 YMR194C-AYMR194C-A 225 nt2.9□□□□□ -1.95
LCD1Q04377 RPL36AYMR194W 303 nt2.9□□□□□ -1.95
LCD1Q04377 YNL337WYNL337W 255 nt2.9□□□□□ -1.95
LCD1Q04377 YOR055WYOR055W 435 nt2.9□□□□□ -1.95
LCD1Q04377 MF(ALPHA)1YPL187W 498 nt2.9□□□□□ -1.95
LCD1Q04377 YDR186CYDR186C 2634 nt2.9□□□□□ -1.95
LCD1Q04377 VPS35YJL154C 2835 nt2.9□□□□□ -1.95
LCD1Q04377 REV3YPL167C 4515 nt2.89□□□□□ -1.95
LCD1Q04377 YGL188C-AYGL188C-A 141 nt2.89□□□□□ -1.95
LCD1Q04377 YGR069WYGR069W 336 nt2.89□□□□□ -1.95
LCD1Q04377 MRPL33YMR286W 261 nt2.89□□□□□ -1.95
LCD1Q04377 GCV2YMR189W 3105 nt2.89□□□□□ -1.95
LCD1Q04377 YGL069CYGL069C 465 nt2.88□□□□□ -1.95
LCD1Q04377 YOR225WYOR225W 330 nt2.88□□□□□ -1.95
LCD1Q04377 STE11YLR362W 2154 nt2.88□□□□□ -1.95
LCD1Q04377 PDR3YBL005W 2931 nt2.87□□□□□ -1.95
Retrieved 100 of 7,029 protein–RNA pairs in 18.9 ms