Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.84■□□□□ 0.77
CDH13P55290 AC243732.1-201ENST00000612648 864 ntBASIC19.84■□□□□ 0.77
CDH13P55290 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH13P55290 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CDH13P55290 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.84■□□□□ 0.77
CDH13P55290 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH13P55290 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDH13P55290 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.84■□□□□ 0.77
CDH13P55290 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.83■□□□□ 0.77
CDH13P55290 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 AC019069.1-201ENST00000610008 1333 ntBASIC19.83■□□□□ 0.77
CDH13P55290 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CDH13P55290 TCF3P1-201ENST00000423021 1937 ntBASIC19.83■□□□□ 0.77
CDH13P55290 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDH13P55290 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH13P55290 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH13P55290 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.83■□□□□ 0.77
CDH13P55290 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDH13P55290 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CDH13P55290 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.83■□□□□ 0.76
CDH13P55290 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.83■□□□□ 0.76
CDH13P55290 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.83■□□□□ 0.76
CDH13P55290 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDH13P55290 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDH13P55290 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDH13P55290 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.82■□□□□ 0.76
CDH13P55290 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH13P55290 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.82■□□□□ 0.76
CDH13P55290 AC007322.3-201ENST00000426526 701 ntBASIC19.82■□□□□ 0.76
CDH13P55290 SLC7A5P1-201ENST00000568957 537 ntBASIC19.82■□□□□ 0.76
CDH13P55290 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.82■□□□□ 0.76
CDH13P55290 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH13P55290 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.82■□□□□ 0.76
CDH13P55290 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDH13P55290 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDH13P55290 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH13P55290 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH13P55290 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.81■□□□□ 0.76
CDH13P55290 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH13P55290 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDH13P55290 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.81■□□□□ 0.76
CDH13P55290 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
CDH13P55290 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.81■□□□□ 0.76
CDH13P55290 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDH13P55290 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH13P55290 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.8■□□□□ 0.76
CDH13P55290 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDH13P55290 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 KRT19P1-201ENST00000405746 1186 ntBASIC19.8■□□□□ 0.76
CDH13P55290 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.8■□□□□ 0.76
CDH13P55290 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.8■□□□□ 0.76
CDH13P55290 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.8■□□□□ 0.76
CDH13P55290 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CDH13P55290 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CDH13P55290 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDH13P55290 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDH13P55290 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.79■□□□□ 0.76
CDH13P55290 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDH13P55290 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms