Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LIMK2P53671 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.48■□□□□ 0.87
LIMK2P53671 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LIMK2P53671 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LIMK2P53671 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.47■□□□□ 0.87
LIMK2P53671 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.47■□□□□ 0.87
LIMK2P53671 TSPY6P-201ENST00000448518 926 ntBASIC20.47■□□□□ 0.87
LIMK2P53671 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.47■□□□□ 0.87
LIMK2P53671 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.47■□□□□ 0.87
LIMK2P53671 AC142086.2-201ENST00000569753 217 ntBASIC20.47■□□□□ 0.87
LIMK2P53671 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 AC010536.3-201ENST00000620306 533 ntBASIC20.47■□□□□ 0.87
LIMK2P53671 AC120498.10-201ENST00000621827 505 ntBASIC20.47■□□□□ 0.87
LIMK2P53671 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LIMK2P53671 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.47■□□□□ 0.87
LIMK2P53671 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LIMK2P53671 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
LIMK2P53671 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LIMK2P53671 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
LIMK2P53671 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 CNN2P6-201ENST00000439038 900 ntBASIC20.46■□□□□ 0.87
LIMK2P53671 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.46■□□□□ 0.87
LIMK2P53671 SLC7A5P2-201ENST00000553010 536 ntBASIC20.46■□□□□ 0.87
LIMK2P53671 SLC7A5P1-201ENST00000568957 537 ntBASIC20.46■□□□□ 0.87
LIMK2P53671 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.46■□□□□ 0.87
LIMK2P53671 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LIMK2P53671 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LIMK2P53671 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.46■□□□□ 0.87
LIMK2P53671 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
LIMK2P53671 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LIMK2P53671 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 AC092720.2-201ENST00000602388 1665 ntBASIC20.45■□□□□ 0.86
LIMK2P53671 AC099778.1-201ENST00000568593 1911 ntBASIC20.45■□□□□ 0.86
LIMK2P53671 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.45■□□□□ 0.86
LIMK2P53671 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LIMK2P53671 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.45■□□□□ 0.86
LIMK2P53671 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LIMK2P53671 PCDHAC2-203ENST00000615316 3011 ntBASIC20.45■□□□□ 0.86
LIMK2P53671 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.44■□□□□ 0.86
LIMK2P53671 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
LIMK2P53671 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LIMK2P53671 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.44■□□□□ 0.86
LIMK2P53671 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.44■□□□□ 0.86
LIMK2P53671 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LIMK2P53671 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.43■□□□□ 0.86
LIMK2P53671 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LIMK2P53671 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
LIMK2P53671 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIMK2P53671 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
LIMK2P53671 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIMK2P53671 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LIMK2P53671 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
LIMK2P53671 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.43■□□□□ 0.86
LIMK2P53671 GUSBP6-202ENST00000438529 1198 ntBASIC20.43■□□□□ 0.86
LIMK2P53671 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms