Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.91■■□□□ 1.1
PDE6CP51160 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
PDE6CP51160 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 AC007322.3-201ENST00000426526 701 ntBASIC21.91■■□□□ 1.1
PDE6CP51160 GUSBP6-202ENST00000438529 1198 ntBASIC21.91■■□□□ 1.1
PDE6CP51160 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.91■■□□□ 1.1
PDE6CP51160 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.91■■□□□ 1.1
PDE6CP51160 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PDE6CP51160 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.91■■□□□ 1.1
PDE6CP51160 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
PDE6CP51160 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.9■■□□□ 1.1
PDE6CP51160 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
PDE6CP51160 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6CP51160 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PDE6CP51160 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
PDE6CP51160 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.9■■□□□ 1.1
PDE6CP51160 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.9■■□□□ 1.1
PDE6CP51160 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
PDE6CP51160 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PDE6CP51160 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
PDE6CP51160 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PDE6CP51160 AC020907.5-201ENST00000624372 1936 ntBASIC21.9■■□□□ 1.1
PDE6CP51160 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE6CP51160 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE6CP51160 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6CP51160 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
PDE6CP51160 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
PDE6CP51160 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.89■■□□□ 1.1
PDE6CP51160 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6CP51160 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
PDE6CP51160 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6CP51160 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.89■■□□□ 1.1
PDE6CP51160 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6CP51160 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE6CP51160 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.89■■□□□ 1.1
PDE6CP51160 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PDE6CP51160 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PDE6CP51160 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
PDE6CP51160 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PDE6CP51160 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PDE6CP51160 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PDE6CP51160 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE6CP51160 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE6CP51160 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 AL512625.2-201ENST00000417533 625 ntBASIC21.88■■□□□ 1.09
PDE6CP51160 AC073210.2-201ENST00000430369 194 ntBASIC21.88■■□□□ 1.09
PDE6CP51160 CDV3P1-201ENST00000471403 739 ntBASIC21.88■■□□□ 1.09
PDE6CP51160 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.88■■□□□ 1.09
PDE6CP51160 AL591742.1-201ENST00000604433 565 ntBASIC21.88■■□□□ 1.09
PDE6CP51160 AC133041.1-202ENST00000642053 222 ntBASIC21.88■■□□□ 1.09
PDE6CP51160 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
PDE6CP51160 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PDE6CP51160 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.88■■□□□ 1.09
PDE6CP51160 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE6CP51160 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms