Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 tC(GCA)GtC(GCA)G 72 nt2.46□□□□□ -2.02
VPS41P38959 tC(GCA)P1tC(GCA)P1 72 nt2.46□□□□□ -2.02
VPS41P38959 tC(GCA)P2tC(GCA)P2 72 nt2.46□□□□□ -2.02
VPS41P38959 TWF1YGR080W 999 nt2.46□□□□□ -2.02
VPS41P38959 MSL1YIR009W 336 nt2.46□□□□□ -2.02
VPS41P38959 YKL165C-AYKL165C-A 234 nt2.46□□□□□ -2.02
VPS41P38959 SAP185YJL098W 3177 nt2.46□□□□□ -2.02
VPS41P38959 MSB1YOR188W 3414 nt2.45□□□□□ -2.02
VPS41P38959 PSO2YMR137C 1986 nt2.45□□□□□ -2.02
VPS41P38959 TAE2YPL009C 3117 nt2.45□□□□□ -2.02
VPS41P38959 YDL041WYDL041W 354 nt2.45□□□□□ -2.02
VPS41P38959 YHR180W-AYHR180W-A 183 nt2.45□□□□□ -2.02
VPS41P38959 GPI14YJR013W 1212 nt2.45□□□□□ -2.02
VPS41P38959 LCL2YLR104W 396 nt2.45□□□□□ -2.02
VPS41P38959 CCW14YLR390W-A 717 nt2.45□□□□□ -2.02
VPS41P38959 PRE8YML092C 753 nt2.45□□□□□ -2.02
VPS41P38959 RPL9BYNL067W 576 nt2.45□□□□□ -2.02
VPS41P38959 IRC10YOL015W 1761 nt2.45□□□□□ -2.02
VPS41P38959 HSC82YMR186W 2118 nt2.44□□□□□ -2.02
VPS41P38959 PCF11YDR228C 1881 nt2.44□□□□□ -2.02
VPS41P38959 AFI1YOR129C 2682 nt2.44□□□□□ -2.02
VPS41P38959 AAD16YFL057C 459 nt2.44□□□□□ -2.02
VPS41P38959 PAU14YIL176C 363 nt2.44□□□□□ -2.02
VPS41P38959 PAU1YJL223C 363 nt2.44□□□□□ -2.02
VPS41P38959 RAM2YKL019W 951 nt2.44□□□□□ -2.02
VPS41P38959 YMR320WYMR320W 306 nt2.44□□□□□ -2.02
VPS41P38959 RPS12YOR369C 432 nt2.44□□□□□ -2.02
VPS41P38959 FMP23YBR047W 528 nt2.44□□□□□ -2.02
VPS41P38959 NOP14YDL148C 2433 nt2.44□□□□□ -2.02
VPS41P38959 VPS41YDR080W 2979 nt2.44□□□□□ -2.02
VPS41P38959 HRD3YLR207W 2502 nt2.43□□□□□ -2.02
VPS41P38959 SSD1YDR293C 3753 nt2.43□□□□□ -2.02
VPS41P38959 NAN1YPL126W 2691 nt2.43□□□□□ -2.02
VPS41P38959 YER023C-AYER023C-A 213 nt2.43□□□□□ -2.02
VPS41P38959 YHR032W-AYHR032W-A 180 nt2.43□□□□□ -2.02
VPS41P38959 AYR1YIL124W 894 nt2.43□□□□□ -2.02
VPS41P38959 PGA1YNL158W 597 nt2.43□□□□□ -2.02
VPS41P38959 YOR231C-AYOR231C-A 201 nt2.43□□□□□ -2.02
VPS41P38959 INP51YIL002C 2841 nt2.43□□□□□ -2.02
VPS41P38959 SCD5YOR329C 2619 nt2.42□□□□□ -2.02
VPS41P38959 YER097WYER097W 330 nt2.42□□□□□ -2.02
VPS41P38959 tW(UCA)QtW(UCA)Q 74 nt2.42□□□□□ -2.02
VPS41P38959 UTP30YKR060W 825 nt2.42□□□□□ -2.02
VPS41P38959 YLR458WYLR458W 381 nt2.42□□□□□ -2.02
VPS41P38959 RPS18BYML026C 441 nt2.42□□□□□ -2.02
VPS41P38959 TIM18YOR297C 579 nt2.42□□□□□ -2.02
VPS41P38959 YBR197CYBR197C 654 nt2.42□□□□□ -2.02
VPS41P38959 SNU114YKL173W 3027 nt2.42□□□□□ -2.02
VPS41P38959 RRP12YPL012W 3687 nt2.42□□□□□ -2.02
VPS41P38959 TFC3YAL001C 3483 nt2.42□□□□□ -2.02
VPS41P38959 REV1YOR346W 2958 nt2.42□□□□□ -2.02
VPS41P38959 MZM1YDR493W 372 nt2.41□□□□□ -2.02
VPS41P38959 YNL010WYNL010W 726 nt2.41□□□□□ -2.02
VPS41P38959 IRC23YOR044W 474 nt2.41□□□□□ -2.02
VPS41P38959 ROX1YPR065W 1107 nt2.41□□□□□ -2.02
VPS41P38959 BNI1YNL271C 5862 nt2.41□□□□□ -2.02
VPS41P38959 STH1YIL126W 4080 nt2.41□□□□□ -2.02
VPS41P38959 UBP2YOR124C 3819 nt2.4□□□□□ -2.02
VPS41P38959 YPR146CYPR146C 330 nt2.4□□□□□ -2.03
VPS41P38959 snR36snR36 182 nt2.4□□□□□ -2.03
VPS41P38959 MGM1YOR211C 2646 nt2.4□□□□□ -2.03
VPS41P38959 SPP41YDR464W 4308 nt2.4□□□□□ -2.03
VPS41P38959 ASG1YIL130W 2895 nt2.39□□□□□ -2.03
VPS41P38959 NPR3YHL023C 3441 nt2.39□□□□□ -2.03
VPS41P38959 FKS3YMR306W 5358 nt2.39□□□□□ -2.03
VPS41P38959 YPR097WYPR097W 3222 nt2.39□□□□□ -2.03
VPS41P38959 YDR102CYDR102C 333 nt2.39□□□□□ -2.03
VPS41P38959 YFL032WYFL032W 321 nt2.39□□□□□ -2.03
VPS41P38959 tW(CCA)G1tW(CCA)G1 72 nt2.39□□□□□ -2.03
VPS41P38959 tW(CCA)G2tW(CCA)G2 72 nt2.39□□□□□ -2.03
VPS41P38959 tW(CCA)JtW(CCA)J 72 nt2.39□□□□□ -2.03
VPS41P38959 tW(CCA)KtW(CCA)K 72 nt2.39□□□□□ -2.03
VPS41P38959 tW(CCA)MtW(CCA)M 72 nt2.39□□□□□ -2.03
VPS41P38959 tW(CCA)PtW(CCA)P 72 nt2.39□□□□□ -2.03
VPS41P38959 TMA22YJR014W 597 nt2.39□□□□□ -2.03
VPS41P38959 RPL36AYMR194W 303 nt2.39□□□□□ -2.03
VPS41P38959 DGR1YNL130C-A 147 nt2.39□□□□□ -2.03
VPS41P38959 YOR282WYOR282W 321 nt2.39□□□□□ -2.03
VPS41P38959 YEL043WYEL043W 2871 nt2.39□□□□□ -2.03
VPS41P38959 INP53YOR109W 3324 nt2.38□□□□□ -2.03
VPS41P38959 SDC1YDR469W 528 nt2.38□□□□□ -2.03
VPS41P38959 YFR056CYFR056C 369 nt2.38□□□□□ -2.03
VPS41P38959 YGL014C-AYGL014C-A 162 nt2.38□□□□□ -2.03
VPS41P38959 LSO2YGR169C-A 279 nt2.38□□□□□ -2.03
VPS41P38959 SCH9YHR205W 2475 nt2.38□□□□□ -2.03
VPS41P38959 RPL40AYIL148W 387 nt2.38□□□□□ -2.03
VPS41P38959 RPL26AYLR344W 384 nt2.38□□□□□ -2.03
VPS41P38959 RGM1YMR182C 636 nt2.38□□□□□ -2.03
VPS41P38959 SCP160YJL080C 3669 nt2.37□□□□□ -2.03
VPS41P38959 YMR324CYMR324C 243 nt2.37□□□□□ -2.03
VPS41P38959 YJL070CYJL070C 2667 nt2.37□□□□□ -2.03
VPS41P38959 JIP5YPR169W 1479 nt2.37□□□□□ -2.03
VPS41P38959 DNA2YHR164C 4569 nt2.37□□□□□ -2.03
VPS41P38959 GIS1YDR096W 2685 nt2.36□□□□□ -2.03
VPS41P38959 KAP123YER110C 3342 nt2.36□□□□□ -2.03
VPS41P38959 snR65snR65 100 nt2.36□□□□□ -2.03
VPS41P38959 YKL083WYKL083W 615 nt2.36□□□□□ -2.03
VPS41P38959 PAU8YAL068C 363 nt2.36□□□□□ -2.03
VPS41P38959 ISF1YMR081C 1017 nt2.36□□□□□ -2.03
VPS41P38959 PAU20YOL161C 363 nt2.36□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 57.3 ms