Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.71■□□□□ 0.91
FDFT1P37268 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
FDFT1P37268 AC087623.3-201ENST00000607047 1098 ntBASIC20.71■□□□□ 0.91
FDFT1P37268 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
FDFT1P37268 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
FDFT1P37268 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.71■□□□□ 0.91
FDFT1P37268 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
FDFT1P37268 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
FDFT1P37268 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FDFT1P37268 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FDFT1P37268 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.7■□□□□ 0.9
FDFT1P37268 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.7■□□□□ 0.9
FDFT1P37268 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
FDFT1P37268 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
FDFT1P37268 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.7■□□□□ 0.9
FDFT1P37268 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FDFT1P37268 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.7■□□□□ 0.9
FDFT1P37268 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.7■□□□□ 0.9
FDFT1P37268 AL591742.1-201ENST00000604433 565 ntBASIC20.7■□□□□ 0.9
FDFT1P37268 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.7■□□□□ 0.9
FDFT1P37268 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
FDFT1P37268 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
FDFT1P37268 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.69■□□□□ 0.9
FDFT1P37268 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FDFT1P37268 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.69■□□□□ 0.9
FDFT1P37268 PGM5P4-201ENST00000421970 445 ntBASIC20.69■□□□□ 0.9
FDFT1P37268 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.69■□□□□ 0.9
FDFT1P37268 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.69■□□□□ 0.9
FDFT1P37268 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FDFT1P37268 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
FDFT1P37268 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.69■□□□□ 0.9
FDFT1P37268 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
FDFT1P37268 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
FDFT1P37268 AL391422.3-201ENST00000603791 2761 ntBASIC20.68■□□□□ 0.9
FDFT1P37268 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FDFT1P37268 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.68■□□□□ 0.9
FDFT1P37268 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FDFT1P37268 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
FDFT1P37268 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
FDFT1P37268 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
FDFT1P37268 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FDFT1P37268 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.68■□□□□ 0.9
FDFT1P37268 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.68■□□□□ 0.9
FDFT1P37268 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.68■□□□□ 0.9
FDFT1P37268 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
FDFT1P37268 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
FDFT1P37268 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
FDFT1P37268 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
FDFT1P37268 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
FDFT1P37268 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
FDFT1P37268 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.68■□□□□ 0.9
FDFT1P37268 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.67■□□□□ 0.9
FDFT1P37268 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FDFT1P37268 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.67■□□□□ 0.9
FDFT1P37268 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.67■□□□□ 0.9
FDFT1P37268 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 AC007322.4-201ENST00000509611 723 ntBASIC20.67■□□□□ 0.9
FDFT1P37268 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.67■□□□□ 0.9
FDFT1P37268 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.67■□□□□ 0.9
FDFT1P37268 AL162412.1-201ENST00000567129 965 ntBASIC20.67■□□□□ 0.9
FDFT1P37268 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
FDFT1P37268 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.67■□□□□ 0.9
FDFT1P37268 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
FDFT1P37268 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
FDFT1P37268 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
FDFT1P37268 SMG8-203ENST00000578922 2178 ntBASIC20.66■□□□□ 0.9
FDFT1P37268 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FDFT1P37268 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
FDFT1P37268 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.66■□□□□ 0.9
FDFT1P37268 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.66■□□□□ 0.9
FDFT1P37268 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FDFT1P37268 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
FDFT1P37268 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
FDFT1P37268 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.66■□□□□ 0.9
FDFT1P37268 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.66■□□□□ 0.9
FDFT1P37268 AC137761.2-201ENST00000561729 223 ntBASIC20.66■□□□□ 0.9
FDFT1P37268 AC145350.3-201ENST00000569033 163 ntBASIC20.66■□□□□ 0.9
FDFT1P37268 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.66■□□□□ 0.9
FDFT1P37268 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
FDFT1P37268 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.66■□□□□ 0.9
FDFT1P37268 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.66■□□□□ 0.9
FDFT1P37268 AC013268.1-206ENST00000638368 961 ntBASIC20.66■□□□□ 0.9
FDFT1P37268 AC112229.1-201ENST00000639295 961 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms