Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC1P35251 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.41■■□□□ 1.02
RFC1P35251 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.41■■□□□ 1.02
RFC1P35251 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC1P35251 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.41■■□□□ 1.02
RFC1P35251 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFC1P35251 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFC1P35251 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFC1P35251 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC1P35251 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
RFC1P35251 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.4■■□□□ 1.02
RFC1P35251 AC231657.2-201ENST00000624556 255 ntBASIC21.4■■□□□ 1.02
RFC1P35251 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFC1P35251 AC092720.2-201ENST00000602388 1665 ntBASIC21.4■■□□□ 1.02
RFC1P35251 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.4■■□□□ 1.02
RFC1P35251 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFC1P35251 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFC1P35251 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFC1P35251 KRT8P36-201ENST00000489121 1440 ntBASIC21.39■■□□□ 1.02
RFC1P35251 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.39■■□□□ 1.02
RFC1P35251 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFC1P35251 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFC1P35251 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 AC007322.1-201ENST00000426983 750 ntBASIC21.39■■□□□ 1.01
RFC1P35251 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RFC1P35251 RARRES2P4-201ENST00000514074 484 ntBASIC21.39■■□□□ 1.01
RFC1P35251 AL137784.2-201ENST00000607332 1000 ntBASIC21.39■■□□□ 1.01
RFC1P35251 AC080038.1-201ENST00000611274 1154 ntBASIC21.39■■□□□ 1.01
RFC1P35251 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
RFC1P35251 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.39■■□□□ 1.01
RFC1P35251 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 AL512408.1-201ENST00000569378 2000 ntBASIC21.39■■□□□ 1.01
RFC1P35251 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.39■■□□□ 1.01
RFC1P35251 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
RFC1P35251 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.39■■□□□ 1.01
RFC1P35251 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RFC1P35251 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.38■■□□□ 1.01
RFC1P35251 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.38■■□□□ 1.01
RFC1P35251 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.38■■□□□ 1.01
RFC1P35251 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
RFC1P35251 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC21.38■■□□□ 1.01
RFC1P35251 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.38■■□□□ 1.01
RFC1P35251 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.38■■□□□ 1.01
RFC1P35251 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.38■■□□□ 1.01
RFC1P35251 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RFC1P35251 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RFC1P35251 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 CYP21A1P-202ENST00000354927 1481 ntBASIC21.38■■□□□ 1.01
RFC1P35251 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RFC1P35251 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.38■■□□□ 1.01
RFC1P35251 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFC1P35251 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.37■■□□□ 1.01
RFC1P35251 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RFC1P35251 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC21.37■■□□□ 1.01
RFC1P35251 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RFC1P35251 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.37■■□□□ 1.01
RFC1P35251 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RFC1P35251 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.37■■□□□ 1.01
RFC1P35251 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.37■■□□□ 1.01
RFC1P35251 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.37■■□□□ 1.01
RFC1P35251 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFC1P35251 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms