Protein–RNA interactions for Protein: P23968

VMA16, V-type proton ATPase subunit c'', yeastyeast

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VMA16P23968 SMA2YML066C 1110 nt2.17□□□□□ -2.06
VMA16P23968 YOR333CYOR333C 417 nt2.17□□□□□ -2.06
VMA16P23968 GPX2YBR244W 489 nt2.17□□□□□ -2.06
VMA16P23968 RAV1YJR033C 4074 nt2.17□□□□□ -2.06
VMA16P23968 AXL1YPR122W 3627 nt2.17□□□□□ -2.06
VMA16P23968 RIC1YLR039C 3171 nt2.16□□□□□ -2.06
VMA16P23968 MGM1YOR211C 2646 nt2.16□□□□□ -2.06
VMA16P23968 YLR012CYLR012C 300 nt2.16□□□□□ -2.06
VMA16P23968 YML009C-AYML009C-A 327 nt2.16□□□□□ -2.06
VMA16P23968 YOL019W-AYOL019W-A 153 nt2.16□□□□□ -2.06
VMA16P23968 CLN3YAL040C 1743 nt2.16□□□□□ -2.06
VMA16P23968 BNI1YNL271C 5862 nt2.16□□□□□ -2.06
VMA16P23968 LYS9YNR050C 1341 nt2.16□□□□□ -2.06
VMA16P23968 RPL27BYDR471W 411 nt2.15□□□□□ -2.07
VMA16P23968 HIT1YJR055W 495 nt2.15□□□□□ -2.07
VMA16P23968 YML037CYML037C 1023 nt2.15□□□□□ -2.07
VMA16P23968 YBR012CYBR012C 420 nt2.15□□□□□ -2.07
VMA16P23968 STH1YIL126W 4080 nt2.15□□□□□ -2.07
VMA16P23968 YDR098C-BYDR098C-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YDR210C-DYDR210C-D 5268 nt2.15□□□□□ -2.07
VMA16P23968 YDR316W-BYDR316W-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YDR365W-BYDR365W-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YER138CYER138C 5268 nt2.15□□□□□ -2.07
VMA16P23968 YER160CYER160C 5268 nt2.15□□□□□ -2.07
VMA16P23968 YGR038C-BYGR038C-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YGR161C-DYGR161C-D 5268 nt2.15□□□□□ -2.07
VMA16P23968 YJR027WYJR027W 5268 nt2.15□□□□□ -2.07
VMA16P23968 YLR157C-BYLR157C-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YML039WYML039W 5268 nt2.15□□□□□ -2.07
VMA16P23968 YML045WYML045W 5268 nt2.15□□□□□ -2.07
VMA16P23968 YMR050CYMR050C 5268 nt2.15□□□□□ -2.07
VMA16P23968 YOL103W-BYOL103W-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YBR012W-BYBR012W-B 5271 nt2.15□□□□□ -2.07
VMA16P23968 YOR142W-BYOR142W-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YPL257W-BYPL257W-B 5268 nt2.15□□□□□ -2.07
VMA16P23968 YPR158W-BYPR158W-B 5271 nt2.15□□□□□ -2.07
VMA16P23968 YLR149CYLR149C 2193 nt2.15□□□□□ -2.07
VMA16P23968 TRA1YHR099W 11235 nt2.14□□□□□ -2.07
VMA16P23968 MCD1YDL003W 1701 nt2.14□□□□□ -2.07
VMA16P23968 HOP2YGL033W 657 nt2.14□□□□□ -2.07
VMA16P23968 YHR028W-AYHR028W-A 321 nt2.14□□□□□ -2.07
VMA16P23968 YOR029WYOR029W 336 nt2.14□□□□□ -2.07
VMA16P23968 NOT5YPR072W 1683 nt2.14□□□□□ -2.07
VMA16P23968 SEC16YPL085W 6588 nt2.14□□□□□ -2.07
VMA16P23968 RGA1YOR127W 3024 nt2.13□□□□□ -2.07
VMA16P23968 MNE1YOR350C 1992 nt2.13□□□□□ -2.07
VMA16P23968 YDL152WYDL152W 366 nt2.13□□□□□ -2.07
VMA16P23968 WIP1YDR374W-A 270 nt2.13□□□□□ -2.07
VMA16P23968 YER137W-AYER137W-A 306 nt2.13□□□□□ -2.07
VMA16P23968 YGL239CYGL239C 315 nt2.13□□□□□ -2.07
VMA16P23968 VPS8YAL002W 3825 nt2.13□□□□□ -2.07
VMA16P23968 YOR121CYOR121C 306 nt2.13□□□□□ -2.07
VMA16P23968 YPL182CYPL182C 384 nt2.13□□□□□ -2.07
VMA16P23968 YPR099CYPR099C 357 nt2.13□□□□□ -2.07
VMA16P23968 YBR224WYBR224W 516 nt2.13□□□□□ -2.07
VMA16P23968 VMR1YHL035C 4779 nt2.12□□□□□ -2.07
VMA16P23968 DIS3YOL021C 3006 nt2.12□□□□□ -2.07
VMA16P23968 YDL011CYDL011C 324 nt2.12□□□□□ -2.07
VMA16P23968 RPL23BYER117W 414 nt2.12□□□□□ -2.07
VMA16P23968 HSK3YKL138C-A 210 nt2.12□□□□□ -2.07
VMA16P23968 YOR394C-AYOR394C-A 168 nt2.12□□□□□ -2.07
VMA16P23968 GIP3YPL137C 3831 nt2.12□□□□□ -2.07
VMA16P23968 RTT107YHR154W 3213 nt2.12□□□□□ -2.07
VMA16P23968 RBK1YCR036W 1002 nt2.11□□□□□ -2.07
VMA16P23968 RUD3YOR216C 1455 nt2.11□□□□□ -2.07
VMA16P23968 SVL3YPL032C 2478 nt2.1□□□□□ -2.07
VMA16P23968 DOT6YER088C 2013 nt2.1□□□□□ -2.07
VMA16P23968 SET2YJL168C 2202 nt2.09□□□□□ -2.07
VMA16P23968 SCH9YHR205W 2475 nt2.09□□□□□ -2.07
VMA16P23968 PEP3YLR148W 2757 nt2.09□□□□□ -2.07
VMA16P23968 YIL066W-AYIL066W-A 444 nt2.09□□□□□ -2.07
VMA16P23968 YLR053CYLR053C 327 nt2.09□□□□□ -2.07
VMA16P23968 RPL9BYNL067W 576 nt2.09□□□□□ -2.07
VMA16P23968 VPH1YOR270C 2523 nt2.09□□□□□ -2.08
VMA16P23968 tC(GCA)BtC(GCA)B 72 nt2.08□□□□□ -2.08
VMA16P23968 tC(GCA)GtC(GCA)G 72 nt2.08□□□□□ -2.08
VMA16P23968 tC(GCA)P1tC(GCA)P1 72 nt2.08□□□□□ -2.08
VMA16P23968 tC(GCA)P2tC(GCA)P2 72 nt2.08□□□□□ -2.08
VMA16P23968 YDR524W-CYDR524W-C 90 nt2.08□□□□□ -2.08
VMA16P23968 ERP6YGL002W 651 nt2.08□□□□□ -2.08
VMA16P23968 YLR154W-EYLR154W-E 204 nt2.08□□□□□ -2.08
VMA16P23968 YBL083CYBL083C 426 nt2.08□□□□□ -2.08
VMA16P23968 PAN3YKL025C 2040 nt2.08□□□□□ -2.08
VMA16P23968 SIR4YDR227W 4077 nt2.07□□□□□ -2.08
VMA16P23968 YOL159C-AYOL159C-A 273 nt2.07□□□□□ -2.08
VMA16P23968 ARP8YOR141C 2646 nt2.07□□□□□ -2.08
VMA16P23968 YPL150WYPL150W 2706 nt2.07□□□□□ -2.08
VMA16P23968 IRR1YIL026C 3453 nt2.07□□□□□ -2.08
VMA16P23968 BUB1YGR188C 3066 nt2.06□□□□□ -2.08
VMA16P23968 SEF1YBL066C 3447 nt2.06□□□□□ -2.08
VMA16P23968 IRC8YJL051W 2469 nt2.06□□□□□ -2.08
VMA16P23968 TRL1YJL087C 2484 nt2.06□□□□□ -2.08
VMA16P23968 YAP6YDR259C 1152 nt2.06□□□□□ -2.08
VMA16P23968 COX14YML129C 213 nt2.06□□□□□ -2.08
VMA16P23968 PGA1YNL158W 597 nt2.06□□□□□ -2.08
VMA16P23968 MNL2YLR057W 2550 nt2.05□□□□□ -2.08
VMA16P23968 SMY1YKL079W 1971 nt2.05□□□□□ -2.08
VMA16P23968 TMN3YER113C 2121 nt2.05□□□□□ -2.08
VMA16P23968 ELG1YOR144C 2376 nt2.05□□□□□ -2.08
VMA16P23968 YGR035CYGR035C 351 nt2.05□□□□□ -2.08
Retrieved 100 of 7,029 protein–RNA pairs in 22.2 ms