Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.78■□□□□ 0.44
UBCP0CG48 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
UBCP0CG48 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.78■□□□□ 0.44
UBCP0CG48 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.78■□□□□ 0.44
UBCP0CG48 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 AFG3L1P-217ENST00000557444 2447 ntBASIC17.78■□□□□ 0.44
UBCP0CG48 AC112907.3-201ENST00000577781 2400 ntBASIC17.78■□□□□ 0.44
UBCP0CG48 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
UBCP0CG48 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UBCP0CG48 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
UBCP0CG48 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UBCP0CG48 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
UBCP0CG48 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UBCP0CG48 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.77■□□□□ 0.44
UBCP0CG48 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.77■□□□□ 0.44
UBCP0CG48 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.77■□□□□ 0.44
UBCP0CG48 CCDC92B-201ENST00000575506 885 ntBASIC17.77■□□□□ 0.44
UBCP0CG48 AC104187.1-201ENST00000607510 612 ntBASIC17.77■□□□□ 0.44
UBCP0CG48 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
UBCP0CG48 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.77■□□□□ 0.44
UBCP0CG48 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UBCP0CG48 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
UBCP0CG48 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
UBCP0CG48 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBCP0CG48 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.77■□□□□ 0.43
UBCP0CG48 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UBCP0CG48 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBCP0CG48 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBCP0CG48 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBCP0CG48 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.77■□□□□ 0.43
UBCP0CG48 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UBCP0CG48 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBCP0CG48 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBCP0CG48 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.76■□□□□ 0.43
UBCP0CG48 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBCP0CG48 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBCP0CG48 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.76■□□□□ 0.43
UBCP0CG48 AC105265.2-201ENST00000467189 838 ntBASIC17.76■□□□□ 0.43
UBCP0CG48 KRT18P20-201ENST00000548986 1279 ntBASIC17.76■□□□□ 0.43
UBCP0CG48 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
UBCP0CG48 AP001160.3-201ENST00000601484 763 ntBASIC17.76■□□□□ 0.43
UBCP0CG48 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.76■□□□□ 0.43
UBCP0CG48 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UBCP0CG48 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBCP0CG48 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UBCP0CG48 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.76■□□□□ 0.43
UBCP0CG48 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.76■□□□□ 0.43
UBCP0CG48 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.76■□□□□ 0.43
UBCP0CG48 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.76■□□□□ 0.43
UBCP0CG48 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBCP0CG48 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
UBCP0CG48 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBCP0CG48 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.75■□□□□ 0.43
UBCP0CG48 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.75■□□□□ 0.43
UBCP0CG48 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.75■□□□□ 0.43
UBCP0CG48 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.75■□□□□ 0.43
UBCP0CG48 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.75■□□□□ 0.43
UBCP0CG48 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.75■□□□□ 0.43
UBCP0CG48 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.75■□□□□ 0.43
UBCP0CG48 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.75■□□□□ 0.43
UBCP0CG48 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBCP0CG48 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBCP0CG48 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBCP0CG48 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.74■□□□□ 0.43
UBCP0CG48 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
UBCP0CG48 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms