Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.23■□□□□ 0.83
SP9P0CG40 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.23■□□□□ 0.83
SP9P0CG40 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.23■□□□□ 0.83
SP9P0CG40 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC20.23■□□□□ 0.83
SP9P0CG40 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.23■□□□□ 0.83
SP9P0CG40 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.23■□□□□ 0.83
SP9P0CG40 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.23■□□□□ 0.83
SP9P0CG40 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
SP9P0CG40 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.23■□□□□ 0.83
SP9P0CG40 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.23■□□□□ 0.83
SP9P0CG40 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SP9P0CG40 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.23■□□□□ 0.83
SP9P0CG40 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.22■□□□□ 0.83
SP9P0CG40 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SP9P0CG40 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SP9P0CG40 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SP9P0CG40 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 KRT18P56-201ENST00000507275 550 ntBASIC20.22■□□□□ 0.83
SP9P0CG40 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.22■□□□□ 0.83
SP9P0CG40 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.22■□□□□ 0.83
SP9P0CG40 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SP9P0CG40 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.21■□□□□ 0.83
SP9P0CG40 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.21■□□□□ 0.83
SP9P0CG40 KSR1P1-201ENST00000446298 240 ntBASIC20.21■□□□□ 0.83
SP9P0CG40 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SP9P0CG40 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SP9P0CG40 AL121906.2-201ENST00000621597 723 ntBASIC20.21■□□□□ 0.83
SP9P0CG40 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SP9P0CG40 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SP9P0CG40 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SP9P0CG40 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SP9P0CG40 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.2■□□□□ 0.82
SP9P0CG40 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SP9P0CG40 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SP9P0CG40 AC027702.1-201ENST00000563810 1770 ntBASIC20.2■□□□□ 0.82
SP9P0CG40 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SP9P0CG40 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.2■□□□□ 0.82
SP9P0CG40 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SP9P0CG40 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.19■□□□□ 0.82
SP9P0CG40 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SP9P0CG40 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.19■□□□□ 0.82
SP9P0CG40 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SP9P0CG40 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SP9P0CG40 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.19■□□□□ 0.82
SP9P0CG40 AK4P3-201ENST00000418260 669 ntBASIC20.19■□□□□ 0.82
SP9P0CG40 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SP9P0CG40 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.19■□□□□ 0.82
SP9P0CG40 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.19■□□□□ 0.82
SP9P0CG40 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.19■□□□□ 0.82
SP9P0CG40 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SP9P0CG40 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SP9P0CG40 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.18■□□□□ 0.82
SP9P0CG40 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.18■□□□□ 0.82
SP9P0CG40 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.18■□□□□ 0.82
SP9P0CG40 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.18■□□□□ 0.82
SP9P0CG40 AC023632.3-201ENST00000521633 145 ntBASIC20.18■□□□□ 0.82
SP9P0CG40 AC022616.7-201ENST00000525383 220 ntBASIC20.18■□□□□ 0.82
SP9P0CG40 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 LINC01238-205ENST00000567549 1107 ntBASIC20.18■□□□□ 0.82
SP9P0CG40 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.18■□□□□ 0.82
SP9P0CG40 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SP9P0CG40 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SP9P0CG40 KRT16P1-201ENST00000399124 1418 ntBASIC20.18■□□□□ 0.82
SP9P0CG40 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.17■□□□□ 0.82
SP9P0CG40 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
SP9P0CG40 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SP9P0CG40 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms