Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 YMR324CYMR324C 243 nt0.68□□□□□ -2.3
RPS28BP0C0X0 SWT1YOR166C 1377 nt0.68□□□□□ -2.3
RPS28BP0C0X0 RTR2YDR066C 591 nt0.67□□□□□ -2.3
RPS28BP0C0X0 CHZ1YER030W 462 nt0.67□□□□□ -2.3
RPS28BP0C0X0 LSO2YGR169C-A 279 nt0.67□□□□□ -2.3
RPS28BP0C0X0 AIM23YJL131C 1071 nt0.67□□□□□ -2.3
RPS28BP0C0X0 RKR1YMR247C 4689 nt0.67□□□□□ -2.3
RPS28BP0C0X0 GDS1YOR355W 1569 nt0.66□□□□□ -2.3
RPS28BP0C0X0 APL5YPL195W 2799 nt0.66□□□□□ -2.3
RPS28BP0C0X0 SPT7YBR081C 3999 nt0.66□□□□□ -2.3
RPS28BP0C0X0 YGR045CYGR045C 363 nt0.66□□□□□ -2.3
RPS28BP0C0X0 CRG1YHR209W 876 nt0.66□□□□□ -2.3
RPS28BP0C0X0 YIL102CYIL102C 306 nt0.66□□□□□ -2.3
RPS28BP0C0X0 YIR020C-BYIR020C-B 735 nt0.66□□□□□ -2.3
RPS28BP0C0X0 SMD3YLR147C 306 nt0.66□□□□□ -2.3
RPS28BP0C0X0 DDR48YMR173W 1293 nt0.66□□□□□ -2.3
RPS28BP0C0X0 YMR272W-BYMR272W-B 108 nt0.66□□□□□ -2.3
RPS28BP0C0X0 NCS2YNL119W 1482 nt0.66□□□□□ -2.3
RPS28BP0C0X0 NUP82YJL061W 2142 nt0.65□□□□□ -2.3
RPS28BP0C0X0 YDL068WYDL068W 330 nt0.65□□□□□ -2.31
RPS28BP0C0X0 PAU2YEL049W 363 nt0.65□□□□□ -2.31
RPS28BP0C0X0 RMD6YEL072W 696 nt0.65□□□□□ -2.31
RPS28BP0C0X0 YBR012CYBR012C 420 nt0.65□□□□□ -2.31
RPS28BP0C0X0 REF2YDR195W 1602 nt0.64□□□□□ -2.31
RPS28BP0C0X0 CDC25YLR310C 4770 nt0.64□□□□□ -2.31
RPS28BP0C0X0 YDR248CYDR248C 582 nt0.64□□□□□ -2.31
RPS28BP0C0X0 SRB7YDR308C 423 nt0.64□□□□□ -2.31
RPS28BP0C0X0 CYC7YEL039C 342 nt0.64□□□□□ -2.31
RPS28BP0C0X0 YBR184WYBR184W 1572 nt0.64□□□□□ -2.31
RPS28BP0C0X0 UTP13YLR222C 2454 nt0.63□□□□□ -2.31
RPS28BP0C0X0 AIM9YER080W 1884 nt0.63□□□□□ -2.31
RPS28BP0C0X0 PHR1YOR386W 1698 nt0.63□□□□□ -2.31
RPS28BP0C0X0 END3YNL084C 1050 nt0.63□□□□□ -2.31
RPS28BP0C0X0 SKP2YNL311C 2292 nt0.63□□□□□ -2.31
RPS28BP0C0X0 TOF2YKR010C 2316 nt0.63□□□□□ -2.31
RPS28BP0C0X0 RPL22BYFL034C-A 369 nt0.62□□□□□ -2.31
RPS28BP0C0X0 OST5YGL226C-A 261 nt0.62□□□□□ -2.31
RPS28BP0C0X0 tW(CCA)G1tW(CCA)G1 72 nt0.62□□□□□ -2.31
RPS28BP0C0X0 tW(CCA)G2tW(CCA)G2 72 nt0.62□□□□□ -2.31
RPS28BP0C0X0 tW(CCA)JtW(CCA)J 72 nt0.62□□□□□ -2.31
RPS28BP0C0X0 tW(CCA)KtW(CCA)K 72 nt0.62□□□□□ -2.31
RPS28BP0C0X0 tW(CCA)MtW(CCA)M 72 nt0.62□□□□□ -2.31
RPS28BP0C0X0 tW(CCA)PtW(CCA)P 72 nt0.62□□□□□ -2.31
RPS28BP0C0X0 CMS1YLR003C 876 nt0.62□□□□□ -2.31
RPS28BP0C0X0 RPS7BYNL096C 573 nt0.62□□□□□ -2.31
RPS28BP0C0X0 YPR172WYPR172W 603 nt0.62□□□□□ -2.31
RPS28BP0C0X0 15S_rRNA15S_rRNA 1649 nt0.62□□□□□ -2.31
RPS28BP0C0X0 GYP5YPL249C 2685 nt0.61□□□□□ -2.31
RPS28BP0C0X0 GNT1YOR320C 1476 nt0.61□□□□□ -2.31
RPS28BP0C0X0 PAU10YDR542W 363 nt0.61□□□□□ -2.31
RPS28BP0C0X0 PAU11YGL261C 363 nt0.61□□□□□ -2.31
RPS28BP0C0X0 TIM8YJR135W-A 264 nt0.61□□□□□ -2.31
RPS28BP0C0X0 PAU4YLR461W 363 nt0.61□□□□□ -2.31
RPS28BP0C0X0 YPL119C-AYPL119C-A 264 nt0.61□□□□□ -2.31
RPS28BP0C0X0 YCL046WYCL046W 324 nt0.61□□□□□ -2.31
RPS28BP0C0X0 KAR3YPR141C 2190 nt0.61□□□□□ -2.31
RPS28BP0C0X0 IRC2YDR112W 309 nt0.6□□□□□ -2.31
RPS28BP0C0X0 tF(GAA)DtF(GAA)D 73 nt0.6□□□□□ -2.31
RPS28BP0C0X0 tF(GAA)NtF(GAA)N 73 nt0.6□□□□□ -2.31
RPS28BP0C0X0 YGR270C-AYGR270C-A 219 nt0.6□□□□□ -2.31
RPS28BP0C0X0 LSM12YHR121W 564 nt0.6□□□□□ -2.31
RPS28BP0C0X0 PAU18YLL064C 363 nt0.6□□□□□ -2.31
RPS28BP0C0X0 RPS22BYLR367W 393 nt0.6□□□□□ -2.31
RPS28BP0C0X0 YMR272W-AYMR272W-A 114 nt0.6□□□□□ -2.31
RPS28BP0C0X0 PAU6YNR076W 363 nt0.6□□□□□ -2.31
RPS28BP0C0X0 MEI5YPL121C 669 nt0.6□□□□□ -2.31
RPS28BP0C0X0 YPR159C-AYPR159C-A 102 nt0.6□□□□□ -2.31
RPS28BP0C0X0 MDM32YOR147W 1869 nt0.59□□□□□ -2.31
RPS28BP0C0X0 YGL109WYGL109W 324 nt0.59□□□□□ -2.31
RPS28BP0C0X0 YMR031W-AYMR031W-A 327 nt0.59□□□□□ -2.31
RPS28BP0C0X0 REV3YPL167C 4515 nt0.58□□□□□ -2.32
RPS28BP0C0X0 YBL010CYBL010C 843 nt0.58□□□□□ -2.32
RPS28BP0C0X0 YOR364WYOR364W 369 nt0.58□□□□□ -2.32
RPS28BP0C0X0 NOC3YLR002C 1992 nt0.57□□□□□ -2.32
RPS28BP0C0X0 COX3Q0275 810 nt0.57□□□□□ -2.32
RPS28BP0C0X0 RPL16AYIL133C 600 nt0.57□□□□□ -2.32
RPS28BP0C0X0 ARV1YLR242C 966 nt0.57□□□□□ -2.32
RPS28BP0C0X0 NUT2YPR168W 474 nt0.57□□□□□ -2.32
RPS28BP0C0X0 YBR221W-AYBR221W-A 105 nt0.57□□□□□ -2.32
RPS28BP0C0X0 MPT5YGL178W 2580 nt0.57□□□□□ -2.32
RPS28BP0C0X0 HDA3YPR179C 1968 nt0.57□□□□□ -2.32
RPS28BP0C0X0 RIM20YOR275C 1986 nt0.56□□□□□ -2.32
RPS28BP0C0X0 COX14YML129C 213 nt0.56□□□□□ -2.32
RPS28BP0C0X0 RPB11YOL005C 363 nt0.56□□□□□ -2.32
RPS28BP0C0X0 YOR199WYOR199W 330 nt0.56□□□□□ -2.32
RPS28BP0C0X0 YBR200W-AYBR200W-A 165 nt0.56□□□□□ -2.32
RPS28BP0C0X0 DCP2YNL118C 2913 nt0.56□□□□□ -2.32
RPS28BP0C0X0 ALY2YJL084C 3141 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YDL206WYDL206W 2289 nt0.55□□□□□ -2.32
RPS28BP0C0X0 snR59snR59 78 nt0.55□□□□□ -2.32
RPS28BP0C0X0 RPL42BYHR141C 321 nt0.55□□□□□ -2.32
RPS28BP0C0X0 RPL42AYNL162W 321 nt0.55□□□□□ -2.32
RPS28BP0C0X0 RBL2YOR265W 321 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YPL080CYPL080C 327 nt0.55□□□□□ -2.32
RPS28BP0C0X0 PIG1YLR273C 1947 nt0.55□□□□□ -2.32
RPS28BP0C0X0 SET3YKR029C 2256 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YDR034C-CYDR034C-C 1317 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YFL002W-BYFL002W-B 1317 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YGR161W-AYGR161W-A 1317 nt0.55□□□□□ -2.32
RPS28BP0C0X0 YLR410W-AYLR410W-A 1317 nt0.55□□□□□ -2.32
Retrieved 100 of 7,029 protein–RNA pairs in 42.5 ms