Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FREM3P0C091 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.48■□□□□ 0.55
FREM3P0C091 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FREM3P0C091 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FREM3P0C091 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.47■□□□□ 0.55
FREM3P0C091 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
FREM3P0C091 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
FREM3P0C091 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.47■□□□□ 0.55
FREM3P0C091 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.47■□□□□ 0.55
FREM3P0C091 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.47■□□□□ 0.55
FREM3P0C091 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.47■□□□□ 0.55
FREM3P0C091 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.47■□□□□ 0.55
FREM3P0C091 AL049796.1-201ENST00000565336 1766 ntBASIC18.47■□□□□ 0.55
FREM3P0C091 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.47■□□□□ 0.55
FREM3P0C091 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.47■□□□□ 0.55
FREM3P0C091 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
FREM3P0C091 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.46■□□□□ 0.55
FREM3P0C091 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.46■□□□□ 0.55
FREM3P0C091 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.46■□□□□ 0.55
FREM3P0C091 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.46■□□□□ 0.55
FREM3P0C091 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.46■□□□□ 0.55
FREM3P0C091 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.46■□□□□ 0.55
FREM3P0C091 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.46■□□□□ 0.55
FREM3P0C091 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.46■□□□□ 0.55
FREM3P0C091 PGM5P4-201ENST00000421970 445 ntBASIC18.46■□□□□ 0.55
FREM3P0C091 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
FREM3P0C091 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
FREM3P0C091 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
FREM3P0C091 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.45■□□□□ 0.54
FREM3P0C091 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 AC008687.6-201ENST00000596318 630 ntBASIC18.45■□□□□ 0.54
FREM3P0C091 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.45■□□□□ 0.54
FREM3P0C091 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.45■□□□□ 0.54
FREM3P0C091 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.45■□□□□ 0.54
FREM3P0C091 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
FREM3P0C091 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
FREM3P0C091 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.44■□□□□ 0.54
FREM3P0C091 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.44■□□□□ 0.54
FREM3P0C091 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
FREM3P0C091 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
FREM3P0C091 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 AC011484.1-201ENST00000377652 1995 ntBASIC18.44■□□□□ 0.54
FREM3P0C091 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.44■□□□□ 0.54
FREM3P0C091 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.44■□□□□ 0.54
FREM3P0C091 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.44■□□□□ 0.54
FREM3P0C091 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.44■□□□□ 0.54
FREM3P0C091 AL589743.5-201ENST00000616611 1050 ntBASIC18.44■□□□□ 0.54
FREM3P0C091 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.44■□□□□ 0.54
FREM3P0C091 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
FREM3P0C091 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.44■□□□□ 0.54
FREM3P0C091 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
FREM3P0C091 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
FREM3P0C091 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.43■□□□□ 0.54
FREM3P0C091 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
FREM3P0C091 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms