Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RHOP08100 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.16■□□□□ 0.98
RHOP08100 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.16■□□□□ 0.98
RHOP08100 PRKY-204ENST00000533551 1019 ntBASIC21.16■□□□□ 0.98
RHOP08100 BX088651.1-201ENST00000540551 451 ntBASIC21.16■□□□□ 0.98
RHOP08100 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.16■□□□□ 0.98
RHOP08100 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
RHOP08100 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RHOP08100 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.16■□□□□ 0.98
RHOP08100 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.16■□□□□ 0.98
RHOP08100 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RHOP08100 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.16■□□□□ 0.98
RHOP08100 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RHOP08100 AC027702.1-201ENST00000563810 1770 ntBASIC21.15■□□□□ 0.98
RHOP08100 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
RHOP08100 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RHOP08100 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.15■□□□□ 0.98
RHOP08100 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RHOP08100 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 RARRES2P10-201ENST00000564312 460 ntBASIC21.15■□□□□ 0.98
RHOP08100 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.15■□□□□ 0.98
RHOP08100 AC113410.3-201ENST00000623366 203 ntBASIC21.15■□□□□ 0.98
RHOP08100 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RHOP08100 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.15■□□□□ 0.98
RHOP08100 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
RHOP08100 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RHOP08100 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
RHOP08100 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RHOP08100 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.14■□□□□ 0.98
RHOP08100 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RHOP08100 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.14■□□□□ 0.97
RHOP08100 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.14■□□□□ 0.97
RHOP08100 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.14■□□□□ 0.97
RHOP08100 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
RHOP08100 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
RHOP08100 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOP08100 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.13■□□□□ 0.97
RHOP08100 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOP08100 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOP08100 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.13■□□□□ 0.97
RHOP08100 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.13■□□□□ 0.97
RHOP08100 MIR4785-201ENST00000585005 73 ntBASIC21.13■□□□□ 0.97
RHOP08100 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
RHOP08100 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.13■□□□□ 0.97
RHOP08100 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RHOP08100 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
RHOP08100 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
RHOP08100 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 KRT8P36-201ENST00000489121 1440 ntBASIC21.12■□□□□ 0.97
RHOP08100 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.12■□□□□ 0.97
RHOP08100 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.12■□□□□ 0.97
RHOP08100 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RHOP08100 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.12■□□□□ 0.97
RHOP08100 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.12■□□□□ 0.97
RHOP08100 AC023632.3-201ENST00000521633 145 ntBASIC21.12■□□□□ 0.97
RHOP08100 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.12■□□□□ 0.97
RHOP08100 LINC01023-201ENST00000606054 436 ntBASIC21.12■□□□□ 0.97
RHOP08100 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RHOP08100 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
RHOP08100 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOP08100 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
RHOP08100 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOP08100 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.11■□□□□ 0.97
RHOP08100 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC21.11■□□□□ 0.97
RHOP08100 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
RHOP08100 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RHOP08100 Z98882.1-201ENST00000622160 2253 ntBASIC21.11■□□□□ 0.97
RHOP08100 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.11■□□□□ 0.97
RHOP08100 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RHOP08100 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RHOP08100 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.11■□□□□ 0.97
RHOP08100 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.11■□□□□ 0.97
RHOP08100 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms