Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBB4AP04350 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBB4AP04350 MIR4787-201ENST00000607364 84 ntBASIC21.76■■□□□ 1.07
TUBB4AP04350 MIR6724-1-201ENST00000616420 92 ntBASIC21.76■■□□□ 1.07
TUBB4AP04350 MIR6724-2-201ENST00000616483 92 ntBASIC21.76■■□□□ 1.07
TUBB4AP04350 MIR6724-4-201ENST00000617390 92 ntBASIC21.76■■□□□ 1.07
TUBB4AP04350 MIR6724-3-201ENST00000622482 92 ntBASIC21.76■■□□□ 1.07
TUBB4AP04350 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBB4AP04350 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TUBB4AP04350 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TUBB4AP04350 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.76■■□□□ 1.07
TUBB4AP04350 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TUBB4AP04350 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.76■■□□□ 1.07
TUBB4AP04350 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TUBB4AP04350 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.76■■□□□ 1.07
TUBB4AP04350 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TUBB4AP04350 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.75■■□□□ 1.07
TUBB4AP04350 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
TUBB4AP04350 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.75■■□□□ 1.07
TUBB4AP04350 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
TUBB4AP04350 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC21.75■■□□□ 1.07
TUBB4AP04350 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TUBB4AP04350 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.74■■□□□ 1.07
TUBB4AP04350 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TUBB4AP04350 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBB4AP04350 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.74■■□□□ 1.07
TUBB4AP04350 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBB4AP04350 SMUG1P1-201ENST00000590640 811 ntBASIC21.74■■□□□ 1.07
TUBB4AP04350 AP004607.4-201ENST00000530158 1459 ntBASIC21.74■■□□□ 1.07
TUBB4AP04350 AC079598.2-202ENST00000546624 1451 ntBASIC21.74■■□□□ 1.07
TUBB4AP04350 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TUBB4AP04350 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC21.74■■□□□ 1.07
TUBB4AP04350 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
TUBB4AP04350 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.74■■□□□ 1.07
TUBB4AP04350 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TUBB4AP04350 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
TUBB4AP04350 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
TUBB4AP04350 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.73■■□□□ 1.07
TUBB4AP04350 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.73■■□□□ 1.07
TUBB4AP04350 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TUBB4AP04350 MIR2861-201ENST00000636310 90 ntBASIC21.73■■□□□ 1.07
TUBB4AP04350 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.73■■□□□ 1.07
TUBB4AP04350 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
TUBB4AP04350 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
TUBB4AP04350 AC026471.1-201ENST00000564629 3026 ntBASIC21.73■■□□□ 1.07
TUBB4AP04350 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBB4AP04350 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.72■■□□□ 1.07
TUBB4AP04350 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TUBB4AP04350 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
TUBB4AP04350 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.72■■□□□ 1.07
TUBB4AP04350 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
TUBB4AP04350 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.72■■□□□ 1.07
TUBB4AP04350 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
TUBB4AP04350 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.72■■□□□ 1.07
TUBB4AP04350 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 AL691432.2-201ENST00000607222 2038 ntBASIC21.72■■□□□ 1.07
TUBB4AP04350 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TUBB4AP04350 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
TUBB4AP04350 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms