Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC4O75487 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 AC007322.4-201ENST00000509611 723 ntBASIC20.29■□□□□ 0.84
GPC4O75487 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 AC121338.2-201ENST00000622535 1744 ntBASIC20.29■□□□□ 0.84
GPC4O75487 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC4O75487 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GPC4O75487 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC4O75487 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
GPC4O75487 AC011484.1-201ENST00000377652 1995 ntBASIC20.28■□□□□ 0.84
GPC4O75487 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC4O75487 PLK5-205ENST00000642079 1969 ntBASIC20.28■□□□□ 0.84
GPC4O75487 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
GPC4O75487 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC4O75487 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GPC4O75487 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
GPC4O75487 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
GPC4O75487 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GPC4O75487 CNN2P6-201ENST00000439038 900 ntBASIC20.28■□□□□ 0.84
GPC4O75487 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC4O75487 AL137784.2-201ENST00000607332 1000 ntBASIC20.28■□□□□ 0.84
GPC4O75487 AC013268.1-206ENST00000638368 961 ntBASIC20.28■□□□□ 0.84
GPC4O75487 AC112229.1-201ENST00000639295 961 ntBASIC20.28■□□□□ 0.84
GPC4O75487 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC4O75487 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
GPC4O75487 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC4O75487 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC4O75487 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC4O75487 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.27■□□□□ 0.84
GPC4O75487 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GPC4O75487 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.27■□□□□ 0.84
GPC4O75487 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.27■□□□□ 0.84
GPC4O75487 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.27■□□□□ 0.84
GPC4O75487 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.27■□□□□ 0.84
GPC4O75487 AC116050.2-201ENST00000612102 1779 ntBASIC20.27■□□□□ 0.84
GPC4O75487 AC004911.1-201ENST00000416316 871 ntBASIC20.27■□□□□ 0.84
GPC4O75487 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
GPC4O75487 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC4O75487 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.27■□□□□ 0.83
GPC4O75487 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
GPC4O75487 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC4O75487 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
GPC4O75487 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC4O75487 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.26■□□□□ 0.83
GPC4O75487 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC20.26■□□□□ 0.83
GPC4O75487 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.26■□□□□ 0.83
GPC4O75487 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
GPC4O75487 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
GPC4O75487 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
GPC4O75487 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 AP005212.1-201ENST00000581547 1997 ntBASIC20.25■□□□□ 0.83
GPC4O75487 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
GPC4O75487 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC4O75487 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.25■□□□□ 0.83
GPC4O75487 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
GPC4O75487 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.25■□□□□ 0.83
GPC4O75487 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.25■□□□□ 0.83
GPC4O75487 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
GPC4O75487 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms