Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHGDHO43175 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PHGDHO43175 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.19■□□□□ 0.82
PHGDHO43175 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PHGDHO43175 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.19■□□□□ 0.82
PHGDHO43175 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PHGDHO43175 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
PHGDHO43175 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PHGDHO43175 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PHGDHO43175 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.18■□□□□ 0.82
PHGDHO43175 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.18■□□□□ 0.82
PHGDHO43175 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.18■□□□□ 0.82
PHGDHO43175 AC007322.3-201ENST00000426526 701 ntBASIC20.18■□□□□ 0.82
PHGDHO43175 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PHGDHO43175 SLC7A5P1-201ENST00000568957 537 ntBASIC20.18■□□□□ 0.82
PHGDHO43175 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.18■□□□□ 0.82
PHGDHO43175 UBE2DNL-204ENST00000602536 740 ntBASIC20.18■□□□□ 0.82
PHGDHO43175 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PHGDHO43175 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PHGDHO43175 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.18■□□□□ 0.82
PHGDHO43175 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
PHGDHO43175 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.18■□□□□ 0.82
PHGDHO43175 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PHGDHO43175 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
PHGDHO43175 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.17■□□□□ 0.82
PHGDHO43175 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.17■□□□□ 0.82
PHGDHO43175 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PHGDHO43175 TCF3P1-201ENST00000423021 1937 ntBASIC20.17■□□□□ 0.82
PHGDHO43175 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.17■□□□□ 0.82
PHGDHO43175 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.17■□□□□ 0.82
PHGDHO43175 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PHGDHO43175 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PHGDHO43175 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PHGDHO43175 KRT19P1-201ENST00000405746 1186 ntBASIC20.16■□□□□ 0.82
PHGDHO43175 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.16■□□□□ 0.82
PHGDHO43175 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.16■□□□□ 0.82
PHGDHO43175 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.16■□□□□ 0.82
PHGDHO43175 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PHGDHO43175 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHGDHO43175 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHGDHO43175 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHGDHO43175 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PHGDHO43175 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.16■□□□□ 0.82
PHGDHO43175 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.16■□□□□ 0.82
PHGDHO43175 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.15■□□□□ 0.82
PHGDHO43175 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.15■□□□□ 0.82
PHGDHO43175 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 RNF165-205ENST00000588679 2904 ntBASIC20.15■□□□□ 0.82
PHGDHO43175 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.15■□□□□ 0.82
PHGDHO43175 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.15■□□□□ 0.82
PHGDHO43175 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PHGDHO43175 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PHGDHO43175 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
PHGDHO43175 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.15■□□□□ 0.82
PHGDHO43175 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.14■□□□□ 0.82
PHGDHO43175 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.14■□□□□ 0.82
PHGDHO43175 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHGDHO43175 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PHGDHO43175 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.14■□□□□ 0.81
PHGDHO43175 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.14■□□□□ 0.81
PHGDHO43175 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.14■□□□□ 0.81
PHGDHO43175 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHGDHO43175 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.14■□□□□ 0.81
PHGDHO43175 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PHGDHO43175 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PHGDHO43175 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PHGDHO43175 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms