Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.77■□□□□ 0.6
TNFRSF11BO00300 MIR2861-201ENST00000636310 90 ntBASIC18.77■□□□□ 0.6
TNFRSF11BO00300 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TNFRSF11BO00300 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
TNFRSF11BO00300 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TNFRSF11BO00300 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.77■□□□□ 0.59
TNFRSF11BO00300 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TNFRSF11BO00300 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.75■□□□□ 0.59
TNFRSF11BO00300 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 AC125437.2-201ENST00000625180 2167 ntBASIC18.75■□□□□ 0.59
TNFRSF11BO00300 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TNFRSF11BO00300 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 AC012414.1-201ENST00000556676 535 ntBASIC18.74■□□□□ 0.59
TNFRSF11BO00300 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 AL158211.5-201ENST00000623583 2518 ntBASIC18.74■□□□□ 0.59
TNFRSF11BO00300 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.74■□□□□ 0.59
TNFRSF11BO00300 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 PBX2P1-201ENST00000493219 1291 ntBASIC18.73■□□□□ 0.59
TNFRSF11BO00300 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 KRT16P2-201ENST00000414673 1423 ntBASIC18.73■□□□□ 0.59
TNFRSF11BO00300 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 AC116050.2-201ENST00000612102 1779 ntBASIC18.73■□□□□ 0.59
TNFRSF11BO00300 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TNFRSF11BO00300 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
TNFRSF11BO00300 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms