Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 HLA-B-256ENST00000639848 1089 ntBASIC22.89■■□□□ 1.25
DDX39AO00148 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
DDX39AO00148 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
DDX39AO00148 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC22.89■■□□□ 1.25
DDX39AO00148 FP700111.2-201ENST00000619190 1892 ntBASIC22.89■■□□□ 1.25
DDX39AO00148 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX39AO00148 CRK-204ENST00000574295 1391 ntTSL 5 BASIC22.89■■□□□ 1.25
DDX39AO00148 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.88■■□□□ 1.25
DDX39AO00148 PNMA6B-201ENST00000538162 1200 ntBASIC22.88■■□□□ 1.25
DDX39AO00148 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
DDX39AO00148 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
DDX39AO00148 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.88■■□□□ 1.25
DDX39AO00148 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
DDX39AO00148 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.87■■□□□ 1.25
DDX39AO00148 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX39AO00148 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
DDX39AO00148 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.87■■□□□ 1.25
DDX39AO00148 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 KRT8P36-201ENST00000489121 1440 ntBASIC22.87■■□□□ 1.25
DDX39AO00148 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.87■■□□□ 1.25
DDX39AO00148 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
DDX39AO00148 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
DDX39AO00148 AC006128.1-201ENST00000624704 1661 ntBASIC22.87■■□□□ 1.25
DDX39AO00148 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
DDX39AO00148 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
DDX39AO00148 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX39AO00148 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX39AO00148 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.86■■□□□ 1.25
DDX39AO00148 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC22.86■■□□□ 1.25
DDX39AO00148 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.86■■□□□ 1.25
DDX39AO00148 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
DDX39AO00148 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.86■■□□□ 1.25
DDX39AO00148 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.86■■□□□ 1.25
DDX39AO00148 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX39AO00148 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX39AO00148 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX39AO00148 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.85■■□□□ 1.25
DDX39AO00148 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX39AO00148 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
DDX39AO00148 BRWD1-AS2-201ENST00000603064 1028 ntBASIC22.85■■□□□ 1.25
DDX39AO00148 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.85■■□□□ 1.25
DDX39AO00148 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC22.85■■□□□ 1.25
DDX39AO00148 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
DDX39AO00148 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX39AO00148 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 KRT18P29-201ENST00000397031 1267 ntBASIC22.84■■□□□ 1.25
DDX39AO00148 SERP1-205ENST00000487153 657 ntTSL 4 BASIC22.84■■□□□ 1.25
DDX39AO00148 SLC29A4P2-201ENST00000504749 1089 ntBASIC22.84■■□□□ 1.25
DDX39AO00148 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 AP003097.1-201ENST00000530657 1135 ntBASIC22.84■■□□□ 1.25
DDX39AO00148 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.84■■□□□ 1.25
DDX39AO00148 AC006058.3-201ENST00000606217 1069 ntBASIC22.84■■□□□ 1.25
DDX39AO00148 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC22.84■■□□□ 1.25
DDX39AO00148 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
DDX39AO00148 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX39AO00148 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC22.83■■□□□ 1.25
DDX39AO00148 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX39AO00148 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX39AO00148 AC026366.1-201ENST00000488803 879 ntBASIC22.83■■□□□ 1.25
DDX39AO00148 ADM-205ENST00000528544 586 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX39AO00148 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
DDX39AO00148 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC22.83■■□□□ 1.25
DDX39AO00148 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
DDX39AO00148 SOX15-203ENST00000570788 1093 ntBASIC22.83■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms