Protein–RNA interactions for Protein: A6NHP3

SPDYE2B, Speedy protein E2B, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE2BA6NHP3 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SPDYE2BA6NHP3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 AC012306.2-201ENST00000609350 630 ntBASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SPDYE2BA6NHP3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 AC097493.4-201ENST00000641197 219 ntBASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SPDYE2BA6NHP3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 AC023632.3-201ENST00000521633 145 ntBASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 AL121829.2-201ENST00000620908 328 ntBASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SPDYE2BA6NHP3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
SPDYE2BA6NHP3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 ECEL1P1-201ENST00000373592 1742 ntBASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 SAPCD2P4-201ENST00000424595 1171 ntBASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SPDYE2BA6NHP3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.21■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms