Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SBNO1A3KN83 RBM17P1-201ENST00000453646 1190 ntBASIC27.77■■■□□ 2.04
SBNO1A3KN83 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC27.77■■■□□ 2.04
SBNO1A3KN83 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC27.77■■■□□ 2.04
SBNO1A3KN83 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC27.77■■■□□ 2.04
SBNO1A3KN83 AL049597.2-201ENST00000565575 961 ntBASIC27.77■■■□□ 2.04
SBNO1A3KN83 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC27.77■■■□□ 2.04
SBNO1A3KN83 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SBNO1A3KN83 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SBNO1A3KN83 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.77■■■□□ 2.04
SBNO1A3KN83 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SBNO1A3KN83 FAM197Y1-201ENST00000421178 764 ntBASIC27.76■■■□□ 2.03
SBNO1A3KN83 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SBNO1A3KN83 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SBNO1A3KN83 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SBNO1A3KN83 MFF-203ENST00000349901 1716 ntTSL 2 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 ME2-206ENST00000638410 2289 ntTSL 5 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 ME2-210ENST00000639255 2262 ntTSL 5 BASIC27.76■■■□□ 2.03
SBNO1A3KN83 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 FDX2-207ENST00000494368 584 ntTSL 4 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 KRT8P9-201ENST00000558927 1449 ntBASIC27.75■■■□□ 2.03
SBNO1A3KN83 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC27.75■■■□□ 2.03
SBNO1A3KN83 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SBNO1A3KN83 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC27.74■■■□□ 2.03
SBNO1A3KN83 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 NUDT16P1-203ENST00000513809 620 ntBASIC27.74■■■□□ 2.03
SBNO1A3KN83 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 TPM1-226ENST00000560959 925 ntTSL 2 BASIC27.74■■■□□ 2.03
SBNO1A3KN83 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC27.74■■■□□ 2.03
SBNO1A3KN83 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC27.74■■■□□ 2.03
SBNO1A3KN83 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
SBNO1A3KN83 AC079598.2-202ENST00000546624 1451 ntBASIC27.74■■■□□ 2.03
SBNO1A3KN83 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
SBNO1A3KN83 EXOC3-AS1-202ENST00000623673 1663 ntBASIC27.74■■■□□ 2.03
SBNO1A3KN83 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SBNO1A3KN83 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC27.73■■■□□ 2.03
SBNO1A3KN83 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SBNO1A3KN83 AC073195.1-201ENST00000607241 877 ntBASIC27.73■■■□□ 2.03
SBNO1A3KN83 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SBNO1A3KN83 AC233723.2-201ENST00000623798 2106 ntBASIC27.73■■■□□ 2.03
SBNO1A3KN83 DECR2-212ENST00000627716 352 ntTSL 2 BASIC27.73■■■□□ 2.03
SBNO1A3KN83 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC27.73■■■□□ 2.03
SBNO1A3KN83 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
SBNO1A3KN83 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SBNO1A3KN83 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SBNO1A3KN83 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC27.73■■■□□ 2.03
SBNO1A3KN83 AC005363.2-201ENST00000618631 242 ntBASIC27.73■■■□□ 2.03
SBNO1A3KN83 GLDC-219ENST00000640208 420 ntTSL 2 BASIC27.73■■■□□ 2.03
SBNO1A3KN83 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC27.73■■■□□ 2.03
SBNO1A3KN83 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SBNO1A3KN83 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SBNO1A3KN83 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC27.72■■■□□ 2.03
SBNO1A3KN83 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SBNO1A3KN83 NBPF21P-201ENST00000425093 1451 ntBASIC27.72■■■□□ 2.03
SBNO1A3KN83 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SBNO1A3KN83 AC113347.1-201ENST00000413321 391 ntBASIC27.72■■■□□ 2.03
SBNO1A3KN83 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC27.72■■■□□ 2.03
SBNO1A3KN83 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SBNO1A3KN83 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SBNO1A3KN83 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
SBNO1A3KN83 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
SBNO1A3KN83 ECEL1P1-201ENST00000373592 1742 ntBASIC27.71■■■□□ 2.03
SBNO1A3KN83 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SBNO1A3KN83 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SBNO1A3KN83 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SBNO1A3KN83 AC005521.1-201ENST00000393351 872 ntBASIC27.71■■■□□ 2.03
SBNO1A3KN83 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC27.71■■■□□ 2.03
SBNO1A3KN83 REXO1L10P-201ENST00000615707 1290 ntBASIC27.71■■■□□ 2.03
SBNO1A3KN83 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms