Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 AFG3L1P-217ENST00000557444 2447 ntBASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV21A0A0B4J279 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV21A0A0B4J279 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 NALT1-201ENST00000429224 738 ntTSL 5 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV21A0A0B4J279 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 AC112907.3-201ENST00000577781 2400 ntBASIC15.07■□□□□ 0
TRAV21A0A0B4J279 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 AL031432.3-201ENST00000607698 485 ntBASIC15.07■□□□□ 0
TRAV21A0A0B4J279 MIR2861-201ENST00000636310 90 ntBASIC15.07■□□□□ 0
TRAV21A0A0B4J279 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV21A0A0B4J279 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 AC010141.2-201ENST00000452426 721 ntBASIC15.06■□□□□ 0
TRAV21A0A0B4J279 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.06■□□□□ 0
TRAV21A0A0B4J279 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms