Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC187A0A096LP49 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC187A0A096LP49 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC187A0A096LP49 AC242852.2-201ENST00000615738 1807 ntBASIC19.33■□□□□ 0.69
CCDC187A0A096LP49 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 AL355075.4-201ENST00000554988 638 ntBASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC187A0A096LP49 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 TSPY15P-201ENST00000457163 923 ntBASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC187A0A096LP49 AC233723.2-201ENST00000623798 2106 ntBASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 AL121829.2-201ENST00000620908 328 ntBASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCDC187A0A096LP49 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 AC097493.4-201ENST00000641197 219 ntBASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.3■□□□□ 0.68
CCDC187A0A096LP49 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 AC026471.5-201ENST00000615068 467 ntBASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CCDC187A0A096LP49 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.28■□□□□ 0.68
CCDC187A0A096LP49 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms