Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV18A0A075B6X5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 AC061975.6-201ENST00000579045 1553 ntBASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 AP000974.1-201ENST00000623909 2387 ntBASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV18A0A075B6X5 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV18A0A075B6X5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 BX842568.3-201ENST00000418104 571 ntBASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 MIR4466-201ENST00000606121 54 ntBASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV18A0A075B6X5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV18A0A075B6X5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.39■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms