Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 AL583852.1-201ENST00000635018 572 ntTSL 4 BASIC8.76□□□□□ -1.01
SLC1A1P43005 PSG8-201ENST00000306511 1441 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 PTPN20-216ENST00000506080 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.76□□□□□ -1.01
SLC1A1P43005 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 DYDC2-207ENST00000616870 1723 ntAPPRIS P3 TSL 3 BASIC8.76□□□□□ -1.01
SLC1A1P43005 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 PRICKLE2-AS3-201ENST00000473434 2496 ntTSL 2 BASIC8.76□□□□□ -1.01
SLC1A1P43005 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.76□□□□□ -1.01
SLC1A1P43005 MEF2A-203ENST00000449277 5182 ntTSL 5 BASIC8.76□□□□□ -1.01
SLC1A1P43005 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SLC1A1P43005 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 CFAP47-201ENST00000297866 3608 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 AC127070.5-201ENST00000623177 2104 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 FBXW7-204ENST00000393956 1735 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 MBIP-201ENST00000318473 1586 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 TMED6-201ENST00000288025 938 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 MIR135B-201ENST00000362189 97 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 S100A8-202ENST00000368733 523 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 MTIF3-202ENST00000381120 1005 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 CCDC134-202ENST00000402061 525 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 MIR1306-201ENST00000408439 85 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 AL136981.1-204ENST00000425090 461 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC8.75□□□□□ -1.01
SLC1A1P43005 AL160408.4-201ENST00000441360 933 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 IFITM4P-207ENST00000441380 420 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 OR7A15P-201ENST00000449848 1009 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 LINC00894-207ENST00000452864 750 ntTSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 RN7SL554P-201ENST00000468197 292 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 AC016546.1-201ENST00000473590 463 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 AC114812.3-201ENST00000509542 730 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 CLEC7A-208ENST00000525605 573 ntTSL 4 BASIC8.75□□□□□ -1.01
SLC1A1P43005 RNF185-AS1-201ENST00000526089 353 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 AP003108.2-208ENST00000543044 883 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 LINC02403-201ENST00000548215 484 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 AC102797.1-201ENST00000565127 545 ntTSL 4 BASIC8.75□□□□□ -1.01
SLC1A1P43005 AC009154.1-201ENST00000565822 508 ntTSL 3 BASIC8.75□□□□□ -1.01
SLC1A1P43005 AC106037.1-201ENST00000584148 336 ntTSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 ZNF85-208ENST00000597314 563 ntTSL 4 BASIC8.75□□□□□ -1.01
SLC1A1P43005 CARMN-212ENST00000614896 536 ntTSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 MIR6505-201ENST00000617206 71 ntBASIC8.75□□□□□ -1.01
SLC1A1P43005 HPS5-201ENST00000349215 4491 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 LINC01725-205ENST00000457273 1991 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 KCNA2-205ENST00000633222 11877 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
SLC1A1P43005 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC8.75□□□□□ -1.01
SLC1A1P43005 ABLIM3-207ENST00000508983 2011 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
SLC1A1P43005 AC107419.1-201ENST00000422048 1879 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 BTK-210ENST00000621635 2767 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 ZNF569-202ENST00000392149 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 KIF4B-201ENST00000435029 4378 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
SLC1A1P43005 CPEB1-AS1-202ENST00000618020 2994 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 NFIA-208ENST00000407417 2123 ntTSL 2 BASIC8.74□□□□□ -1.01
SLC1A1P43005 WDHD1-202ENST00000420358 3722 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 CORIN-208ENST00000508498 3200 ntAPPRIS ALT2 TSL 2 BASIC8.74□□□□□ -1.01
SLC1A1P43005 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 AC019077.1-201ENST00000356499 397 ntTSL 3 BASIC8.74□□□□□ -1.01
SLC1A1P43005 RN7SKP136-201ENST00000410927 300 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC8.74□□□□□ -1.01
SLC1A1P43005 AL645937.5-202ENST00000415595 944 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 AL117339.1-201ENST00000419779 428 ntTSL 2 BASIC8.74□□□□□ -1.01
SLC1A1P43005 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC8.74□□□□□ -1.01
SLC1A1P43005 AL049648.1-201ENST00000443692 282 ntTSL 3 BASIC8.74□□□□□ -1.01
SLC1A1P43005 YWHABP1-201ENST00000445359 727 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 AC244505.1-201ENST00000502642 307 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 AC023644.1-201ENST00000523380 859 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 KARS-209ENST00000568378 459 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 RN7SL279P-201ENST00000582185 284 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
SLC1A1P43005 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.74□□□□□ -1.01
SLC1A1P43005 AL161729.2-201ENST00000605700 456 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 AC009159.3-201ENST00000615570 804 ntBASIC8.74□□□□□ -1.01
SLC1A1P43005 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms