Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 RN7SL856P-201ENST00000461754 298 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 RN7SL841P-201ENST00000470547 297 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AC114812.3-201ENST00000509542 730 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 TPT1P5-201ENST00000511433 521 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 MTND6P25-201ENST00000528711 516 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 FLVCR2-202ENST00000539311 1221 ntTSL 2 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 LINC02345-202ENST00000558081 1147 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AC015910.1-202ENST00000580264 633 ntTSL 5 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 JPT1-211ENST00000581874 517 ntTSL 5 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AL691432.1-202ENST00000597891 502 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AL662791.5-201ENST00000623334 466 ntTSL 3 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AL158175.1-203ENST00000635654 1281 ntTSL 5 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 PHF21A-201ENST00000323180 3675 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 RPGRIP1L-210ENST00000568653 2429 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 OPTN-203ENST00000378748 3521 ntAPPRIS P2 TSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 EFCAB1-201ENST00000262103 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 USP28-205ENST00000537706 1900 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
LMO3Q8TAP4 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 CHD2-212ENST00000627622 1740 ntTSL 2 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 PBRM1-208ENST00000410007 4905 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 SLF2-201ENST00000238961 7288 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ATP1A2-202ENST00000392233 3338 ntTSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 WEE2-AS1-206ENST00000478332 2259 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 DNAH9-215ENST00000608377 3147 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 NCKAP5-201ENST00000317721 7593 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 NCKAP5-205ENST00000409261 7594 ntAPPRIS P4 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 STXBP6-207ENST00000550887 1311 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AC090984.1-201ENST00000623172 1332 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 PLGLB1-201ENST00000355705 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RN7SKP48-201ENST00000365031 328 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 FAM209B-201ENST00000371325 694 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AIF1-203ENST00000376059 711 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 SNORA57.2-201ENST00000391265 128 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RN7SKP152-201ENST00000410444 315 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RPSAP53-201ENST00000433498 862 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 CYP4A22-AS1-201ENST00000444042 921 ntTSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AL161937.1-202ENST00000451960 341 ntTSL 3 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AL356310.1-201ENST00000452024 585 ntTSL 3 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RN7SL218P-201ENST00000464637 299 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RN7SL77P-201ENST00000473332 294 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 NUTF2P5-201ENST00000475013 379 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RN7SL130P-201ENST00000489463 305 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 RN7SL472P-201ENST00000492799 293 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AC026415.1-201ENST00000505404 471 ntTSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AC073648.1-201ENST00000508957 930 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 OR7E85P-201ENST00000512164 985 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 IGKV2D-14-201ENST00000522473 355 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AP005597.3-201ENST00000532369 799 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 NTAN1P3-201ENST00000535885 715 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AC087393.3-201ENST00000584971 166 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AC005758.1-201ENST00000586408 625 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 CD209-211ENST00000602261 939 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 SLC25A6P5-202ENST00000602729 1038 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 Metazoa_SRP.146-201ENST00000619409 286 ntBASIC8.91□□□□□ -0.98
LMO3Q8TAP4 HIST1H2BM-201ENST00000621112 381 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 CD86-201ENST00000264468 2634 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 NCEH1-206ENST00000543711 4062 ntTSL 2 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ESCO2-201ENST00000305188 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 TNFSF15-202ENST00000374045 6687 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 VLDLR-203ENST00000382100 9163 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ODF2L-213ENST00000478286 1650 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 ZNF544-201ENST00000269829 3547 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
LMO3Q8TAP4 SCD-201ENST00000370355 5362 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 ANKRD27-201ENST00000306065 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AL954650.1-201ENST00000430776 2051 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC8.9□□□□□ -0.98
LMO3Q8TAP4 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC8.9□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms