Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 AC135731.2-201ENST00000603029 2098 ntBASIC7.8□□□□□ -1.16
P04436 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.8□□□□□ -1.16
P04436 MAPK10-205ENST00000395160 2448 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 MRO-211ENST00000610511 5257 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
P04436 CPA6-201ENST00000297770 2002 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 LINC00608-202ENST00000432733 2818 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 NR1I3-204ENST00000367982 1322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
P04436 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 TMEM19-204ENST00000549735 1772 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 EHHADH-AS1-201ENST00000417720 1416 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 GPNMB-202ENST00000381990 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 SERPINB9-201ENST00000380698 4118 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 TTTY25P-201ENST00000558356 1505 ntBASIC7.79□□□□□ -1.16
P04436 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
P04436 CHN2-211ENST00000424025 2279 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC7.79□□□□□ -1.16
P04436 RNA5SP336-201ENST00000364189 117 ntBASIC7.79□□□□□ -1.16
P04436 RNA5SP141-201ENST00000364543 120 ntBASIC7.79□□□□□ -1.16
P04436 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 DNAJB1-202ENST00000396969 1287 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 BMP2KL-201ENST00000414251 1225 ntBASIC7.79□□□□□ -1.16
P04436 LINC00426-204ENST00000420219 1056 ntTSL 5 BASIC7.79□□□□□ -1.16
P04436 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC7.79□□□□□ -1.16
P04436 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC7.79□□□□□ -1.16
P04436 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 PIGCP2-201ENST00000433617 835 ntBASIC7.79□□□□□ -1.16
P04436 RPL35P4-201ENST00000446039 322 ntBASIC7.79□□□□□ -1.16
P04436 AL109945.1-201ENST00000448134 687 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 RN7SL434P-201ENST00000495872 271 ntBASIC7.79□□□□□ -1.16
P04436 AC027338.2-201ENST00000504382 526 ntBASIC7.79□□□□□ -1.16
P04436 AC010307.4-202ENST00000507403 389 ntTSL 3 BASIC7.79□□□□□ -1.16
P04436 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 IMPA1P1-202ENST00000522318 332 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC7.79□□□□□ -1.16
P04436 AC138907.7-202ENST00000565347 540 ntTSL 4 BASIC7.79□□□□□ -1.16
P04436 LINC01834-201ENST00000567374 385 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 AC141257.2-201ENST00000569199 540 ntTSL 5 BASIC7.79□□□□□ -1.16
P04436 CARMN-212ENST00000614896 536 ntTSL 5 BASIC7.79□□□□□ -1.16
P04436 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC7.79□□□□□ -1.16
P04436 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 GYG2-209ENST00000639373 2900 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
P04436 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC7.79□□□□□ -1.16
P04436 CREM-204ENST00000345491 2220 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 DPH3-202ENST00000383775 3052 ntTSL 2 BASIC7.79□□□□□ -1.16
P04436 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
P04436 AC005722.2-201ENST00000577087 3370 ntBASIC7.79□□□□□ -1.16
P04436 AC092681.2-201ENST00000565102 3044 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 LINC01886-202ENST00000443205 1539 ntTSL 3 BASIC7.78□□□□□ -1.16
P04436 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 HM13-224ENST00000498035 3932 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 SCFD1-202ENST00000396629 2021 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 DCLRE1C-207ENST00000378255 2807 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 FLJ31356-202ENST00000445878 3001 ntTSL 4 BASIC7.78□□□□□ -1.16
P04436 SNCA-206ENST00000420646 3127 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 ITIH4-201ENST00000266041 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 ADD2-204ENST00000407644 3741 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 FO393411.1-201ENST00000325612 420 ntBASIC7.78□□□□□ -1.16
P04436 TMED5-201ENST00000370280 750 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 AC084880.1-201ENST00000392530 545 ntBASIC7.78□□□□□ -1.16
P04436 AC034228.1-201ENST00000424244 923 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 AL356259.1-201ENST00000443554 1059 ntTSL 5 BASIC7.78□□□□□ -1.16
P04436 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC7.78□□□□□ -1.16
P04436 LINC02434-201ENST00000502419 677 ntTSL 3 BASIC7.78□□□□□ -1.16
P04436 ASPH-206ENST00000517661 809 ntTSL 2 BASIC7.78□□□□□ -1.16
P04436 AC007751.2-201ENST00000534173 291 ntBASIC7.78□□□□□ -1.16
P04436 AC084033.2-201ENST00000551532 967 ntBASIC7.78□□□□□ -1.16
P04436 AL109628.2-201ENST00000554037 201 ntBASIC7.78□□□□□ -1.16
P04436 LINC02325-203ENST00000554862 733 ntTSL 4 BASIC7.78□□□□□ -1.16
P04436 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC7.78□□□□□ -1.16
P04436 AC022148.2-201ENST00000586176 560 ntBASIC7.78□□□□□ -1.16
P04436 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC7.78□□□□□ -1.16
P04436 AC174071.1-201ENST00000603069 517 ntBASIC7.78□□□□□ -1.16
P04436 AC083964.1-201ENST00000607549 630 ntBASIC7.78□□□□□ -1.16
P04436 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC7.78□□□□□ -1.16
P04436 TMEM55A-206ENST00000630164 171 ntTSL 5 BASIC7.78□□□□□ -1.16
P04436 AC108477.1-201ENST00000636764 526 ntTSL 4 BASIC7.78□□□□□ -1.16
P04436 CPA2-201ENST00000222481 1366 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 ARG1-202ENST00000356962 1468 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
P04436 PTPDC1-204ENST00000620992 4437 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
P04436 PHACTR2-AS1-201ENST00000450575 1699 ntTSL 5 BASIC7.78□□□□□ -1.16
P04436 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
P04436 CTNNA1-243ENST00000540387 2684 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms