Protein–RNA interactions for Protein: Q9P1A2

PPP4R1L, Putative serine/threonine-protein phosphatase 4 regulatory subunit 1-like, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1LQ9P1A2 SORCS1-203ENST00000369698 2638 ntTSL 5 BASIC8.02□□□□□ -1.13
PPP4R1LQ9P1A2 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
PPP4R1LQ9P1A2 FAM126A-202ENST00000409923 3130 ntTSL 5 BASIC8.02□□□□□ -1.13
PPP4R1LQ9P1A2 AL022323.2-201ENST00000623239 3000 ntBASIC8.02□□□□□ -1.13
PPP4R1LQ9P1A2 EPB41L2-228ENST00000531410 2926 ntTSL 5 BASIC8.02□□□□□ -1.13
PPP4R1LQ9P1A2 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
PPP4R1LQ9P1A2 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 EXOC6-204ENST00000443748 3310 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 OR7E24-201ENST00000456448 1550 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ERG-205ENST00000398910 4954 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 IFT74-202ENST00000429045 1462 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 CAST-244ENST00000515663 1473 ntTSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 PTPN20-205ENST00000395721 2779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 MAPK10-232ENST00000515400 2076 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ZNF37A-202ENST00000361085 8738 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 PAQR5-205ENST00000561153 2347 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 MAPK10-240ENST00000639175 2596 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 OSBPL3-203ENST00000396431 2969 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL137784.1-201ENST00000407121 745 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 U3.33-201ENST00000408117 204 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 MAGEC3-202ENST00000409007 1290 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 UST-AS1-201ENST00000413845 714 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ZRANB2-AS1-201ENST00000426999 607 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 OR52J2P-201ENST00000427973 939 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL159166.1-201ENST00000437430 329 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL596188.1-201ENST00000452888 370 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL450023.2-201ENST00000453276 545 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 OSBPL10-AS1-207ENST00000455961 411 ntTSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC020718.1-201ENST00000456031 556 ntTSL 4 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC093270.1-201ENST00000482584 486 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 HNRNPA1P20-201ENST00000484852 955 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 GAPDHP47-201ENST00000489113 999 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 RN7SL280P-201ENST00000496490 288 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 RACK1-211ENST00000504726 388 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 RNA5SP40-201ENST00000517147 110 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 BRIX1P1-201ENST00000521785 908 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 USP2-AS1-203ENST00000530002 764 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 PCED1B-AS1-204ENST00000547851 780 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC084033.1-201ENST00000550830 633 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC020892.2-201ENST00000557891 387 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL049634.2-203ENST00000564763 588 ntAPPRIS ALT2 TSL 4 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC009120.2-202ENST00000566411 679 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL031281.2-201ENST00000606754 748 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC116050.1-201ENST00000609777 1194 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 CEACAM20-202ENST00000614577 1530 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 HSP90AB1-204ENST00000620073 2644 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 PPARG-209ENST00000397026 2029 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 LSM5-208ENST00000450169 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 LDB3-201ENST00000263066 3873 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 WIPF3-203ENST00000409290 4002 ntAPPRIS P2 TSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ANXA2-204ENST00000451270 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AC007126.1-201ENST00000508202 4781 ntBASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 C11orf70-201ENST00000434758 2193 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ZNF195-230ENST00000620374 3342 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 KATNAL2-201ENST00000245121 2833 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NBPF19-204ENST00000611931 2051 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NBPF26-205ENST00000615219 2051 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NBPF12-207ENST00000617864 2051 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 NBPF20-204ENST00000620821 2051 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 SMG7-202ENST00000367537 5970 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 ZNF410-224ENST00000615736 1551 ntTSL 5 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 USP13-203ENST00000496897 2747 ntTSL 2 BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
PPP4R1LQ9P1A2 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 SWT1-202ENST00000367501 3001 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 PWAR5-201ENST00000624480 3180 ntBASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
PPP4R1LQ9P1A2 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms