Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AHCYP5-201ENST00000331585 1238 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 MAP1LC3C-201ENST00000357246 1182 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 RNA5SP250-201ENST00000362534 119 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 CFL1P8-201ENST00000436148 475 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AL049648.1-201ENST00000443692 282 ntTSL 3 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AL031727.1-201ENST00000457263 455 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 DLX5-202ENST00000486603 1074 ntTSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 RPL4P1-201ENST00000496596 1278 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC095050.1-201ENST00000502661 905 ntTSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC106868.1-201ENST00000505272 992 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 C4orf22-205ENST00000508675 753 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC021001.1-201ENST00000518703 987 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 MRPS28-207ENST00000521434 585 ntTSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AC090159.1-201ENST00000525309 806 ntTSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 MYL6-207ENST00000547649 655 ntAPPRIS ALT1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 IGKV3OR2-5-201ENST00000605851 281 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 OR1X1P-201ENST00000606159 931 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 CTNNA2-209ENST00000466387 4349 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 CXorf57-201ENST00000372544 3607 ntTSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 ERCC8-201ENST00000265038 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 AOX2P-204ENST00000487742 3284 ntBASIC8.98□□□□□ -0.97
LMO3Q8TAP4 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 SH3BP5-AS1-202ENST00000420195 5570 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 PLEK-201ENST00000234313 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 PSMC2-206ENST00000640277 1357 ntTSL 5 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 HCP5-201ENST00000414046 2658 ntTSL 4 BASIC8.98□□□□□ -0.97
LMO3Q8TAP4 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 FSD2-201ENST00000334574 6418 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC003684.1-201ENST00000432442 1715 ntTSL 2 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC108463.3-201ENST00000603748 1482 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 STXBP5-AS1-209ENST00000606831 2025 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 SAMMSON-206ENST00000641053 1516 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 OR2D3-201ENST00000317834 1070 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 CLYBL-201ENST00000339105 1169 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 UCMA-201ENST00000378681 826 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 MT-TS1-201ENST00000387416 69 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 LINC01799-201ENST00000411701 386 ntTSL 3 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 RPL12P14-201ENST00000431782 490 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AL355483.4-201ENST00000432653 470 ntTSL 3 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC007683.1-201ENST00000432746 591 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AL441963.1-201ENST00000435137 792 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 RPE-210ENST00000438204 796 ntTSL 2 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 P2RX6P-201ENST00000439119 468 ntTSL 3 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 HAUS1P2-201ENST00000439908 784 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 RPE-213ENST00000445268 668 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AL365436.1-201ENST00000452587 495 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 LINC00945-201ENST00000453716 753 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 RPS27P12-201ENST00000464146 258 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 KLF7P1-201ENST00000490941 1048 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 KRT18P51-201ENST00000504966 746 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 ARL1-203ENST00000539055 1231 ntTSL 2 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 MIR3680-2-201ENST00000578247 87 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 MIR3680-1-201ENST00000581433 87 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 RN7SL619P-201ENST00000581753 258 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC011523.1-201ENST00000598079 392 ntTSL 3 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 BNIP3P17-201ENST00000605448 595 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 ZNF75A-209ENST00000612186 1118 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC067904.3-201ENST00000617126 261 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 CBR3-AS1-213ENST00000623647 815 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 LINC01727-204ENST00000624385 940 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC068631.1-215ENST00000630331 490 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC004491.1-201ENST00000623029 1882 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 CELF2-202ENST00000399850 7085 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 PBLD-202ENST00000309049 2165 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 IL5RA-202ENST00000311981 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 NIPA2P4-201ENST00000523928 1341 ntBASIC8.97□□□□□ -0.97
LMO3Q8TAP4 LANCL1-201ENST00000233714 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 BCAT1-206ENST00000539780 1360 ntTSL 2 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 SPTBN1-207ENST00000615901 10226 ntTSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 NCKAP5-204ENST00000409213 2390 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
LMO3Q8TAP4 AC127070.5-201ENST00000623177 2104 ntBASIC8.96□□□□□ -0.97
LMO3Q8TAP4 KCNMB2-207ENST00000452583 1455 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LMO3Q8TAP4 UGT2B28-202ENST00000511240 1525 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
LMO3Q8TAP4 PPARG-201ENST00000287820 1850 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
LMO3Q8TAP4 SLC8A1-201ENST00000332839 2922 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
LMO3Q8TAP4 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
LMO3Q8TAP4 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC8.96□□□□□ -0.98
LMO3Q8TAP4 ARHGDIB-201ENST00000228945 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms