Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 TERF1P5-201ENST00000477545 1207 ntBASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
HLA-DRB4X5D2U9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 AC007322.3-201ENST00000426526 701 ntBASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 CDV3P1-201ENST00000471403 739 ntBASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 MFSD11-216ENST00000590393 1141 ntBASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 AC013268.1-206ENST00000638368 961 ntBASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 AC112229.1-201ENST00000639295 961 ntBASIC15.27■□□□□ 0.04
HLA-DRB4X5D2U9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DRB4X5D2U9 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 STAC-204ENST00000457375 1366 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 AC007322.4-201ENST00000509611 723 ntBASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 BID-214ENST00000617586 542 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DRB4X5D2U9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DRB4X5D2U9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms