Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 RARRES2P6-201ENST00000567333 442 ntBASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 FAM21FP-204ENST00000608637 956 ntBASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 KRT8P36-201ENST00000489121 1440 ntBASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
CYP46A1Q9Y6A2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 AL591742.1-201ENST00000604433 565 ntBASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 AC099778.1-201ENST00000568593 1911 ntBASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
CYP46A1Q9Y6A2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
CYP46A1Q9Y6A2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CYP46A1Q9Y6A2 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CYP46A1Q9Y6A2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 AC112907.3-201ENST00000577781 2400 ntBASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 PCDHAC2-203ENST00000615316 3011 ntBASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.12■■□□□ 1.45
CYP46A1Q9Y6A2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 SMG8-203ENST00000578922 2178 ntBASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 AC007322.4-201ENST00000509611 723 ntBASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 WWOX-218ENST00000627394 894 ntTSL 5 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 AC013268.1-206ENST00000638368 961 ntBASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 AC112229.1-201ENST00000639295 961 ntBASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP46A1Q9Y6A2 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms