Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RPH3AQ9Y2J0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 AC093827.2-201ENST00000512654 315 ntBASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 KRT18P6-201ENST00000555540 1265 ntBASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.61■□□□□ 0.57
RPH3AQ9Y2J0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 AC098934.4-201ENST00000564127 592 ntBASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
RPH3AQ9Y2J0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 CYP21A1P-202ENST00000354927 1481 ntBASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 PLK5-205ENST00000642079 1969 ntBASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 MCRIP2P1-201ENST00000394346 511 ntBASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.59■□□□□ 0.57
RPH3AQ9Y2J0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPH3AQ9Y2J0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 LSM12P1-201ENST00000411836 588 ntBASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 CYP2T3P-201ENST00000601990 817 ntBASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 KRT17P1-201ENST00000399211 1546 ntBASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPH3AQ9Y2J0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.57■□□□□ 0.56
RPH3AQ9Y2J0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms