Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHA4Q9UN74 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 GAMT-205ENST00000640762 751 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 AL157384.1-201ENST00000445995 2473 ntBASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHA4Q9UN74 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 LSM12P1-201ENST00000411836 588 ntBASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PCDHA4Q9UN74 AC092720.2-201ENST00000602388 1665 ntBASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 STK25-205ENST00000405883 1904 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 AC020907.5-201ENST00000624372 1936 ntBASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHA4Q9UN74 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 HLA-L-209ENST00000420110 1011 ntBASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHA4Q9UN74 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 ID1-201ENST00000376105 1233 ntBASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 AC092118.2-201ENST00000613495 667 ntBASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 GABARAPL3-202ENST00000624044 1851 ntBASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHA4Q9UN74 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHA4Q9UN74 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms