Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 KRT17P6-201ENST00000453795 1220 ntBASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
RIMBP3Q9UFD9 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 HMGA1P5-201ENST00000412453 271 ntBASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RIMBP3Q9UFD9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 AC124283.5-201ENST00000624661 1809 ntBASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC32.86■■■□□ 2.85
RIMBP3Q9UFD9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC32.85■■■□□ 2.85
RIMBP3Q9UFD9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RIMBP3Q9UFD9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC32.85■■■□□ 2.85
RIMBP3Q9UFD9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC32.85■■■□□ 2.85
RIMBP3Q9UFD9 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC32.85■■■□□ 2.85
RIMBP3Q9UFD9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 DGCR10-201ENST00000609839 495 ntBASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC32.84■■■□□ 2.85
RIMBP3Q9UFD9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 C11orf96-202ENST00000528572 1834 ntBASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 AL671277.2-201ENST00000458060 996 ntBASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
RIMBP3Q9UFD9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC32.82■■■□□ 2.85
RIMBP3Q9UFD9 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 AL359075.1-203ENST00000462729 1002 ntBASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 AC004264.1-201ENST00000608354 794 ntBASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RIMBP3Q9UFD9 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC32.81■■■□□ 2.84
RIMBP3Q9UFD9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 AC003102.1-202ENST00000563394 1796 ntBASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
RIMBP3Q9UFD9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC32.79■■■□□ 2.84
RIMBP3Q9UFD9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms