Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 ITM2C-210ENST00000620962 501 ntBASIC19.44■□□□□ 0.7
CCDC88CQ9P219 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 AP005212.1-201ENST00000581547 1997 ntBASIC19.44■□□□□ 0.7
CCDC88CQ9P219 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 AC142381.4-202ENST00000563973 229 ntBASIC19.44■□□□□ 0.7
CCDC88CQ9P219 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC88CQ9P219 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 AC008687.6-201ENST00000596318 630 ntBASIC19.43■□□□□ 0.7
CCDC88CQ9P219 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC88CQ9P219 AC116050.2-201ENST00000612102 1779 ntBASIC19.43■□□□□ 0.7
CCDC88CQ9P219 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.42■□□□□ 0.7
CCDC88CQ9P219 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC88CQ9P219 AC087633.2-202ENST00000565166 1439 ntBASIC19.41■□□□□ 0.7
CCDC88CQ9P219 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 AL356652.1-201ENST00000615962 565 ntBASIC19.41■□□□□ 0.7
CCDC88CQ9P219 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 CDV3P1-201ENST00000471403 739 ntBASIC19.41■□□□□ 0.7
CCDC88CQ9P219 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC88CQ9P219 AC092118.2-201ENST00000613495 667 ntBASIC19.41■□□□□ 0.7
CCDC88CQ9P219 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 MCRIP2P1-201ENST00000394346 511 ntBASIC19.4■□□□□ 0.7
CCDC88CQ9P219 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC88CQ9P219 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.39■□□□□ 0.7
CCDC88CQ9P219 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms