Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 NAPSB-206ENST00000562112 1266 ntBASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 AL121829.2-201ENST00000620908 328 ntBASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 AC073508.3-201ENST00000619697 1419 ntBASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 NBPF21P-201ENST00000425093 1451 ntBASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TFCP2L1Q9NZI6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TFCP2L1Q9NZI6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 CYP2D8P-201ENST00000433633 1490 ntBASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 AC104076.2-201ENST00000448912 469 ntBASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 AL356652.1-201ENST00000615962 565 ntBASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26■■□□□ 1.75
TFCP2L1Q9NZI6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 HES2-206ENST00000489730 730 ntTSL 2 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TFCP2L1Q9NZI6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 AL390955.1-201ENST00000428694 934 ntBASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TFCP2L1Q9NZI6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 SLC25A3P1-201ENST00000443844 931 ntBASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 F2R-202ENST00000505600 442 ntTSL 2 BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.97■■□□□ 1.75
TFCP2L1Q9NZI6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 TMA16-209ENST00000513272 803 ntTSL 2 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 AC010947.1-201ENST00000623454 693 ntBASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.96■■□□□ 1.75
TFCP2L1Q9NZI6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TFCP2L1Q9NZI6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TFCP2L1Q9NZI6 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms