Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SH2D4AQ9H788 Z98882.1-201ENST00000622160 2253 ntBASIC23.8■■□□□ 1.4
SH2D4AQ9H788 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SH2D4AQ9H788 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.79■■□□□ 1.4
SH2D4AQ9H788 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 SERP1-205ENST00000487153 657 ntTSL 4 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 C1QBPP2-201ENST00000528754 825 ntBASIC23.79■■□□□ 1.4
SH2D4AQ9H788 FAM197Y4-202ENST00000622692 608 ntBASIC23.79■■□□□ 1.4
SH2D4AQ9H788 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
SH2D4AQ9H788 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 AL390719.1-204ENST00000412397 1219 ntBASIC23.78■■□□□ 1.4
SH2D4AQ9H788 ABHD17AP6-201ENST00000458502 1044 ntBASIC23.78■■□□□ 1.4
SH2D4AQ9H788 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 RPPH1-201ENST00000516869 333 ntBASIC23.78■■□□□ 1.4
SH2D4AQ9H788 AC005829.2-201ENST00000571422 1056 ntBASIC23.78■■□□□ 1.4
SH2D4AQ9H788 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.78■■□□□ 1.4
SH2D4AQ9H788 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 PEX7-202ENST00000367756 680 ntTSL 3 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 RPS2P4-201ENST00000476944 856 ntBASIC23.77■■□□□ 1.4
SH2D4AQ9H788 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.77■■□□□ 1.4
SH2D4AQ9H788 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
SH2D4AQ9H788 FBXW4P1-201ENST00000426721 2239 ntBASIC23.76■■□□□ 1.39
SH2D4AQ9H788 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 RHOD-202ENST00000532559 538 ntTSL 3 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 AC233263.1-201ENST00000578059 224 ntBASIC23.75■■□□□ 1.39
SH2D4AQ9H788 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC23.75■■□□□ 1.39
SH2D4AQ9H788 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 KLF2-202ENST00000592003 564 ntTSL 3 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
SH2D4AQ9H788 MME-217ENST00000616757 1315 ntTSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms