Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EBF3Q9H4W6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
EBF3Q9H4W6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.2■□□□□ 0.99
EBF3Q9H4W6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 SOX15-203ENST00000570788 1093 ntBASIC21.2■□□□□ 0.98
EBF3Q9H4W6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
EBF3Q9H4W6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 KRT17P3-201ENST00000420566 1262 ntBASIC21.19■□□□□ 0.98
EBF3Q9H4W6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.19■□□□□ 0.98
EBF3Q9H4W6 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.19■□□□□ 0.98
EBF3Q9H4W6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
EBF3Q9H4W6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 C1QBPP2-201ENST00000528754 825 ntBASIC21.18■□□□□ 0.98
EBF3Q9H4W6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.18■□□□□ 0.98
EBF3Q9H4W6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 UBE2SP1-201ENST00000450587 669 ntBASIC21.17■□□□□ 0.98
EBF3Q9H4W6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 AC008550.1-201ENST00000511500 884 ntBASIC21.17■□□□□ 0.98
EBF3Q9H4W6 RPPH1-201ENST00000516869 333 ntBASIC21.17■□□□□ 0.98
EBF3Q9H4W6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 AC233263.1-201ENST00000578059 224 ntBASIC21.17■□□□□ 0.98
EBF3Q9H4W6 FAM197Y4-202ENST00000622692 608 ntBASIC21.17■□□□□ 0.98
EBF3Q9H4W6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EBF3Q9H4W6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms