Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 AL162377.1-201ENST00000618844 1793 ntBASIC25.68■■□□□ 1.7
CHMP4BQ9H444 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
CHMP4BQ9H444 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 AC092667.1-201ENST00000434301 2586 ntBASIC25.67■■□□□ 1.7
CHMP4BQ9H444 CYP21A1P-202ENST00000354927 1481 ntBASIC25.67■■□□□ 1.7
CHMP4BQ9H444 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 CNN2P6-201ENST00000439038 900 ntBASIC25.67■■□□□ 1.7
CHMP4BQ9H444 AC068338.2-201ENST00000563278 1430 ntBASIC25.67■■□□□ 1.7
CHMP4BQ9H444 PLLP-204ENST00000569059 665 ntTSL 3 BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 AL356652.1-201ENST00000615962 565 ntBASIC25.67■■□□□ 1.7
CHMP4BQ9H444 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC25.67■■□□□ 1.7
CHMP4BQ9H444 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 AC022517.1-201ENST00000592429 346 ntBASIC25.66■■□□□ 1.7
CHMP4BQ9H444 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 AC069236.1-201ENST00000604339 616 ntBASIC25.66■■□□□ 1.7
CHMP4BQ9H444 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
CHMP4BQ9H444 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 AC016405.3-201ENST00000607710 860 ntBASIC25.65■■□□□ 1.7
CHMP4BQ9H444 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC25.65■■□□□ 1.7
CHMP4BQ9H444 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 MCRIP2P1-201ENST00000394346 511 ntBASIC25.64■■□□□ 1.7
CHMP4BQ9H444 AC007322.1-201ENST00000426983 750 ntBASIC25.64■■□□□ 1.7
CHMP4BQ9H444 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.64■■□□□ 1.7
CHMP4BQ9H444 AC008694.1-202ENST00000636953 945 ntBASIC25.64■■□□□ 1.7
CHMP4BQ9H444 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CHMP4BQ9H444 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP4BQ9H444 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP4BQ9H444 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP4BQ9H444 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.69
CHMP4BQ9H444 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CHMP4BQ9H444 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CHMP4BQ9H444 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.62■■□□□ 1.69
CHMP4BQ9H444 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC25.62■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms