Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 AC097658.1-201ENST00000475555 843 ntBASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM62Q9BVG3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 AL137060.1-201ENST00000618151 2648 ntBASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 DUSP5P2-201ENST00000426873 1033 ntBASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 AC091874.3-201ENST00000512672 1195 ntBASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM62Q9BVG3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 C2orf69P4-201ENST00000565394 541 ntBASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM62Q9BVG3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM62Q9BVG3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 MYC-209ENST00000641252 345 ntBASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM62Q9BVG3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM62Q9BVG3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM62Q9BVG3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms