Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
YIPF4Q9BSR8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.13■□□□□ 0.65
YIPF4Q9BSR8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 AC007322.3-201ENST00000426526 701 ntBASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
YIPF4Q9BSR8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
YIPF4Q9BSR8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 AC010536.3-201ENST00000620306 533 ntBASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
YIPF4Q9BSR8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 TERF1P5-201ENST00000477545 1207 ntBASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.09■□□□□ 0.65
YIPF4Q9BSR8 AL512408.1-201ENST00000569378 2000 ntBASIC19.08■□□□□ 0.65
YIPF4Q9BSR8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms