Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 KRT8P36-201ENST00000489121 1440 ntBASIC20.66■□□□□ 0.9
SEMA3CQ99985 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SEMA3CQ99985 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SEMA3CQ99985 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3CQ99985 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.65■□□□□ 0.9
SEMA3CQ99985 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SEMA3CQ99985 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3CQ99985 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.65■□□□□ 0.9
SEMA3CQ99985 AC104771.1-201ENST00000603335 964 ntBASIC20.65■□□□□ 0.9
SEMA3CQ99985 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SEMA3CQ99985 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.65■□□□□ 0.9
SEMA3CQ99985 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA3CQ99985 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SEMA3CQ99985 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SEMA3CQ99985 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.64■□□□□ 0.9
SEMA3CQ99985 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.64■□□□□ 0.9
SEMA3CQ99985 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3CQ99985 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3CQ99985 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3CQ99985 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 GUSBP6-202ENST00000438529 1198 ntBASIC20.64■□□□□ 0.89
SEMA3CQ99985 TSPY6P-201ENST00000448518 926 ntBASIC20.64■□□□□ 0.89
SEMA3CQ99985 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 FEM1AP1-201ENST00000431297 1995 ntBASIC20.64■□□□□ 0.89
SEMA3CQ99985 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3CQ99985 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SEMA3CQ99985 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 AL157384.1-201ENST00000445995 2473 ntBASIC20.64■□□□□ 0.89
SEMA3CQ99985 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SEMA3CQ99985 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 KRT17P1-201ENST00000399211 1546 ntBASIC20.63■□□□□ 0.89
SEMA3CQ99985 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 BX276092.2-201ENST00000417668 665 ntBASIC20.63■□□□□ 0.89
SEMA3CQ99985 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.63■□□□□ 0.89
SEMA3CQ99985 AC073314.1-201ENST00000568729 2216 ntBASIC20.63■□□□□ 0.89
SEMA3CQ99985 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SEMA3CQ99985 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3CQ99985 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3CQ99985 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3CQ99985 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3CQ99985 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SEMA3CQ99985 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3CQ99985 SLC29A4P1-201ENST00000398760 971 ntBASIC20.62■□□□□ 0.89
SEMA3CQ99985 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.62■□□□□ 0.89
SEMA3CQ99985 AC105020.6-201ENST00000621523 1217 ntBASIC20.62■□□□□ 0.89
SEMA3CQ99985 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SEMA3CQ99985 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SEMA3CQ99985 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SEMA3CQ99985 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3CQ99985 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3CQ99985 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SEMA3CQ99985 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SEMA3CQ99985 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms