Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.15■□□□□ 0.34
NEIL1Q96FI4 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.14■□□□□ 0.34
NEIL1Q96FI4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.14■□□□□ 0.34
NEIL1Q96FI4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.14■□□□□ 0.33
NEIL1Q96FI4 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NEIL1Q96FI4 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.13■□□□□ 0.33
NEIL1Q96FI4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 AC073210.2-201ENST00000430369 194 ntBASIC17.13■□□□□ 0.33
NEIL1Q96FI4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 AC069152.1-201ENST00000438030 544 ntBASIC17.13■□□□□ 0.33
NEIL1Q96FI4 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 AC092118.2-201ENST00000613495 667 ntBASIC17.13■□□□□ 0.33
NEIL1Q96FI4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.13■□□□□ 0.33
NEIL1Q96FI4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 LSM12P1-201ENST00000411836 588 ntBASIC17.12■□□□□ 0.33
NEIL1Q96FI4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
NEIL1Q96FI4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.11■□□□□ 0.33
NEIL1Q96FI4 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.11■□□□□ 0.33
NEIL1Q96FI4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 CYP2T3P-201ENST00000601990 817 ntBASIC17.11■□□□□ 0.33
NEIL1Q96FI4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NEIL1Q96FI4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms