Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PTP4A1Q93096 SMG8-203ENST00000578922 2178 ntBASIC18.27■□□□□ 0.51
PTP4A1Q93096 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PTP4A1Q93096 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A1Q93096 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A1Q93096 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A1Q93096 AC010141.2-201ENST00000452426 721 ntBASIC18.26■□□□□ 0.51
PTP4A1Q93096 SLC7A5P2-201ENST00000553010 536 ntBASIC18.26■□□□□ 0.51
PTP4A1Q93096 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 AC120498.10-201ENST00000621827 505 ntBASIC18.26■□□□□ 0.51
PTP4A1Q93096 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A1Q93096 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
PTP4A1Q93096 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PTP4A1Q93096 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 TERF1P2-201ENST00000583350 1212 ntBASIC18.25■□□□□ 0.51
PTP4A1Q93096 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.25■□□□□ 0.51
PTP4A1Q93096 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PTP4A1Q93096 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
PTP4A1Q93096 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PTP4A1Q93096 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 AC097381.1-201ENST00000429019 1296 ntBASIC18.23■□□□□ 0.51
PTP4A1Q93096 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 KRT18P14-201ENST00000534205 1250 ntBASIC18.23■□□□□ 0.51
PTP4A1Q93096 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 CCDC92B-201ENST00000575506 885 ntBASIC18.23■□□□□ 0.51
PTP4A1Q93096 MIR6821-201ENST00000617625 74 ntBASIC18.23■□□□□ 0.51
PTP4A1Q93096 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PTP4A1Q93096 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PTP4A1Q93096 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PTP4A1Q93096 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PTP4A1Q93096 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms