Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPB3Q92617 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPB3Q92617 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPB3Q92617 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NPIPB3Q92617 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPB3Q92617 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB3Q92617 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPB3Q92617 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPB3Q92617 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 IRS3P-201ENST00000223076 1006 ntBASIC16.02■□□□□ 0.16
NPIPB3Q92617 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 AC010141.2-201ENST00000452426 721 ntBASIC16.02■□□□□ 0.16
NPIPB3Q92617 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC16.02■□□□□ 0.16
NPIPB3Q92617 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB3Q92617 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPB3Q92617 AC116050.2-201ENST00000612102 1779 ntBASIC16.02■□□□□ 0.15
NPIPB3Q92617 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPB3Q92617 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPB3Q92617 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
NPIPB3Q92617 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
NPIPB3Q92617 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPB3Q92617 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPB3Q92617 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPB3Q92617 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.01■□□□□ 0.15
NPIPB3Q92617 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPB3Q92617 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPB3Q92617 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
NPIPB3Q92617 AC007952.6-201ENST00000573168 2673 ntBASIC16.01■□□□□ 0.15
NPIPB3Q92617 AC003957.1-201ENST00000625108 2673 ntBASIC16.01■□□□□ 0.15
NPIPB3Q92617 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC16■□□□□ 0.15
NPIPB3Q92617 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16■□□□□ 0.15
NPIPB3Q92617 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16■□□□□ 0.15
NPIPB3Q92617 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16■□□□□ 0.15
NPIPB3Q92617 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16■□□□□ 0.15
NPIPB3Q92617 MIR2861-201ENST00000636310 90 ntBASIC16■□□□□ 0.15
NPIPB3Q92617 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16■□□□□ 0.15
NPIPB3Q92617 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16■□□□□ 0.15
NPIPB3Q92617 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16■□□□□ 0.15
NPIPB3Q92617 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPIPB3Q92617 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPIPB3Q92617 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms