Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ATL1Q8WXF7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 AC068338.2-201ENST00000563278 1430 ntBASIC19.85■□□□□ 0.77
ATL1Q8WXF7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.85■□□□□ 0.77
ATL1Q8WXF7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 AC069236.1-201ENST00000604339 616 ntBASIC19.84■□□□□ 0.77
ATL1Q8WXF7 AC008694.1-202ENST00000636953 945 ntBASIC19.84■□□□□ 0.77
ATL1Q8WXF7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 AC020907.5-201ENST00000624372 1936 ntBASIC19.84■□□□□ 0.77
ATL1Q8WXF7 AC092720.2-201ENST00000602388 1665 ntBASIC19.84■□□□□ 0.77
ATL1Q8WXF7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.84■□□□□ 0.77
ATL1Q8WXF7 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 RARRES2P4-201ENST00000514074 484 ntBASIC19.83■□□□□ 0.77
ATL1Q8WXF7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 AL137784.2-201ENST00000607332 1000 ntBASIC19.83■□□□□ 0.77
ATL1Q8WXF7 AC016405.3-201ENST00000607710 860 ntBASIC19.83■□□□□ 0.77
ATL1Q8WXF7 AC100791.3-201ENST00000617619 330 ntBASIC19.83■□□□□ 0.77
ATL1Q8WXF7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.83■□□□□ 0.77
ATL1Q8WXF7 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 KRT8P36-201ENST00000489121 1440 ntBASIC19.83■□□□□ 0.76
ATL1Q8WXF7 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 AC073314.1-201ENST00000568729 2216 ntBASIC19.83■□□□□ 0.76
ATL1Q8WXF7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.83■□□□□ 0.76
ATL1Q8WXF7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATL1Q8WXF7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms