Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
SVIPQ8NHG7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.35
SVIPQ8NHG7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 AP005212.1-201ENST00000581547 1997 ntBASIC12.89□□□□□ -0.35
SVIPQ8NHG7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SVIPQ8NHG7 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 AC092117.1-201ENST00000621230 3250 ntBASIC12.88□□□□□ -0.35
SVIPQ8NHG7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 CICP7-201ENST00000432723 2477 ntBASIC12.88□□□□□ -0.35
SVIPQ8NHG7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
SVIPQ8NHG7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 FST-202ENST00000396947 2538 ntTSL 5 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 AC015909.5-201ENST00000624336 2266 ntBASIC12.87□□□□□ -0.35
SVIPQ8NHG7 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 NFE2L3P1-201ENST00000588207 1959 ntBASIC12.87□□□□□ -0.35
SVIPQ8NHG7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SVIPQ8NHG7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SVIPQ8NHG7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms