Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
SPTSSBQ8NFR3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC11.18□□□□□ -0.62
SPTSSBQ8NFR3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 HNRNPLP2-201ENST00000568980 1570 ntBASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
SPTSSBQ8NFR3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms