Protein–RNA interactions for Protein: Q8ND25

ZNRF1, E3 ubiquitin-protein ligase ZNRF1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF1Q8ND25 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.03■□□□□ 0.32
ZNRF1Q8ND25 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 LINC01006-201ENST00000333319 2292 ntBASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 AC093787.1-201ENST00000450396 207 ntBASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ZNRF1Q8ND25 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 AC092667.1-201ENST00000434301 2586 ntBASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ZNRF1Q8ND25 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 MCRIP2P1-201ENST00000394346 511 ntBASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 AC090192.1-201ENST00000517740 490 ntBASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 AC105036.2-201ENST00000569468 176 ntBASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 AC133552.2-202ENST00000575694 574 ntBASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 AC100791.3-201ENST00000617619 330 ntBASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 AC010980.2-201ENST00000587099 1412 ntBASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ZNRF1Q8ND25 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 AL512625.2-201ENST00000417533 625 ntBASIC17■□□□□ 0.31
ZNRF1Q8ND25 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 PPP1R14BP3-201ENST00000509033 445 ntBASIC17■□□□□ 0.31
ZNRF1Q8ND25 AF201337.1-201ENST00000520239 748 ntBASIC17■□□□□ 0.31
ZNRF1Q8ND25 AC087633.2-202ENST00000565166 1439 ntBASIC17■□□□□ 0.31
ZNRF1Q8ND25 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC17■□□□□ 0.31
ZNRF1Q8ND25 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17■□□□□ 0.31
ZNRF1Q8ND25 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZNRF1Q8ND25 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms