Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 AL512408.1-201ENST00000569378 2000 ntBASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TMEM116Q8NCL8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 AC010141.2-201ENST00000452426 721 ntBASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TMEM116Q8NCL8 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 AC092720.2-201ENST00000602388 1665 ntBASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM116Q8NCL8 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.04■□□□□ 0.16
TMEM116Q8NCL8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms